RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 POC1BQ8TC44 478 aa7.31□□□□□ -1.24
CAPRIN1-208ENST00000530008 ST8SIA2Q92186 375 aa7.31□□□□□ -1.24
CAPRIN1-208ENST00000530008 PPP2R3CQ969Q6 453 aa7.31□□□□□ -1.24
CAPRIN1-208ENST00000530008 TMEM176AQ96HP8 235 aa7.31□□□□□ -1.24
CAPRIN1-208ENST00000530008 HECAQ9UBI9 543 aaPredicted RBP7.31□□□□□ -1.24
CAPRIN1-208ENST00000530008 CCDC195A0A1B0GUA6 201 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 CHRNDQ07001 517 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 KIAA2012Q0VF49 1180 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 GRM4Q14833 912 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 NBPF8Q3BBV2 869 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 PTCHD3Q3KNS1 767 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 TRIM60Q495X7 471 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 METTL24Q5JXM2 366 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 DSTYKQ6XUX3 929 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 SYT12Q8IV01 421 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 SP8Q8IXZ3 490 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 ELOA2Q8IYF1 753 aaPredicted RBP7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 CEP70Q8NHQ1 597 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 DNAJB14Q8TBM8 379 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 HVCN1Q96D96 273 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 RRP36Q96EU6 259 aaKnown RBP7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 ZNF668Q96K58 619 aaPredicted RBP7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 TWNKQ96RR1 684 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 PNKPQ96T60 521 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 PLA2G12BQ9BX93 195 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 TRIM5Q9C035 493 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 REXO4Q9GZR2 422 aaKnown RBP7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 VPS16Q9H269 839 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 SMOC2Q9H3U7 446 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 ELAC1Q9H777 363 aaKnown RBP7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 TBC1D22BQ9NU19 505 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 DNAJB11Q9UBS4 358 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 C19orf53Q9UNZ5 99 aaPredicted RBP7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 MRPS17Q9Y2R5 130 aaKnown RBP7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 RABGAP1Q9Y3P9 1069 aa7.3□□□□□ -1.24
CAPRIN1-208ENST00000530008 CCDC196A0A1B0GTZ2 297 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 FAM90A18PA6NE21 464 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 FAM90A16PA6NEW6 464 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 FAM90A9PA6NNJ1 464 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 FAM90A5PA8MXJ8 464 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 CD3EAPO15446 510 aaKnown RBP7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 MFAP3LO75121 409 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 PPP6R2O75170 966 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 FAM90A15PP0C7V4 464 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 FAM90A14PP0C7W9 464 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 SPATA31D3P0C874 917 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 AFF3P51826 1226 aaKnown RBP7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 PRKAG1P54619 331 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 GRM7Q14831 915 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 ZNF385BQ569K4 471 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 GPATCH4Q5T3I0 446 aaKnown RBP7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 TTC22Q5TAA0 569 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 MAP3K21Q5TCX8 1036 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 TMEM108Q6UXF1 575 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 ATG14Q6ZNE5 492 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 SPATA31D4Q6ZUB0 917 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 ANKS1BQ7Z6G8 1248 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 SPARTQ8N0X7 666 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 TMEM57Q8N5G2 664 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 TSPYL6Q8N831 410 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 TP53I13Q8NBR0 393 aaPredicted RBP7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 MDGA1Q8NFP4 955 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 ABHD5Q8WTS1 349 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 GOLGA1Q92805 767 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 C3orf49Q96BT1 292 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 LMF1Q96S06 567 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 PTDSS2Q9BVG9 487 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 BRD8Q9H0E9 1235 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 CXorf36Q9H7Y0 433 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 SEC61A2Q9H9S3 476 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 G6PC2Q9NQR9 355 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 IRAK4Q9NWZ3 460 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 CTTNBP2NLQ9P2B4 639 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 HSFX1Q9UBD0 423 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 VPS51Q9UID3 782 aa7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.29□□□□□ -1.24
CAPRIN1-208ENST00000530008 PNMA6EA0A0J9YXQ4 647 aa7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 TCAF2A6NFQ2 919 aa7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 E7EVH7 732 aa7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 ZSCAN9O15535 394 aaPredicted RBP7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 DHHO43323 396 aa7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 IPO13O94829 963 aaKnown RBP7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 INHBBP09529 407 aa7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 HK1P19367 917 aa7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 RPS19P39019 145 aaKnown RBP7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 TOMM20Q15388 145 aa7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 ELAVL1Q15717 326 aaKnown RBP7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 METRNLQ641Q3 311 aa7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 BBS12Q6ZW61 710 aa7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 LINC01356Q8N9X3 169 aa7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 ZNF483Q8TF39 744 aaPredicted RBP7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 WDR60Q8WVS4 1066 aa7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 ZDHHC12Q96GR4 267 aa7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 LRRC37BQ96QE4 947 aa7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 PREBQ9HCU5 417 aa7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 FSCN3Q9NQT6 498 aa7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 NDRG4Q9ULP0 352 aaKnown RBP7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 SMG5Q9UPR3 1016 aaKnown RBP7.28□□□□□ -1.24
CAPRIN1-208ENST00000530008 TAF5LO75529 589 aa7.27□□□□□ -1.25
CAPRIN1-208ENST00000530008 KRT38O76015 456 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms