RNA–Protein interactions for RNA: ENST00000529189.5

LTBP3-212, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-212ENST00000529189 FNIP1Q8TF40 1166 aa24.41■■□□□ 1.5
LTBP3-212ENST00000529189 MCRS1Q96EZ8 462 aa24.41■■□□□ 1.5
LTBP3-212ENST00000529189 MIS12Q9H081 205 aa24.41■■□□□ 1.5
LTBP3-212ENST00000529189 TTC3P53804 2025 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 KPNA7A9QM74 516 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 PODXLO00592 558 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 INPPL1O15357 1258 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 LRPAP1P30533 357 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 RFC1P35251 1148 aaPredicted RBP24.4■■□□□ 1.5
LTBP3-212ENST00000529189 CETN2P41208 172 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 TAF6P49848 677 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 IKBKEQ14164 716 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 LLGL1Q15334 1064 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 SV2CQ496J9 727 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 CCDC105Q8IYK2 499 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 TMEM199Q8N511 208 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 C12orf29Q8N999 325 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 OR6B3Q8NGW1 331 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 JOSD2Q8TAC2 188 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 RBM41Q96IZ5 413 aaKnown RBP24.4■■□□□ 1.5
LTBP3-212ENST00000529189 METTL5Q9NRN9 209 aaKnown RBP24.4■■□□□ 1.5
LTBP3-212ENST00000529189 GDAP2Q9NXN4 497 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 LRFN2Q9ULH4 789 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 CASTOR2A6NHX0 329 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 RALAP11233 206 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 PSMA2P25787 234 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 ALS2CLQ60I27 953 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.4■■□□□ 1.5
LTBP3-212ENST00000529189 C7orf61Q8IZ16 206 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 RCOR2Q8IZ40 523 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 ZBTB9Q96C00 473 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 TRIM31Q9BZY9 425 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 NEUROG2Q9H2A3 272 aa24.4■■□□□ 1.5
LTBP3-212ENST00000529189 HSF2BPO75031 334 aa24.39■■□□□ 1.49
LTBP3-212ENST00000529189 NOMO2Q5JPE7 1267 aa24.39■■□□□ 1.49
LTBP3-212ENST00000529189 PPP1R26Q5T8A7 1209 aaPredicted RBP24.39■■□□□ 1.49
LTBP3-212ENST00000529189 OSBPL8Q9BZF1 889 aa24.39■■□□□ 1.49
LTBP3-212ENST00000529189 NME7Q9Y5B8 376 aa24.39■■□□□ 1.49
LTBP3-212ENST00000529189 LTBP2Q14767 1821 aa24.39■■□□□ 1.49
LTBP3-212ENST00000529189 KRT1P04264 644 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 TCF4P15884 667 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 GATMP50440 423 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 CLCNKBP51801 687 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 DRG2P55039 364 aaKnown RBP24.38■■□□□ 1.49
LTBP3-212ENST00000529189 URGCPQ8TCY9 931 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 HERPUD2Q9BSE4 406 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 DDX56Q9NY93 547 aaKnown RBP24.38■■□□□ 1.49
LTBP3-212ENST00000529189 PRKAG2Q9UGJ0 569 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 A8MXQ7 604 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 SPTLC1O15269 473 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 SYF2O95926 243 aaKnown RBP24.38■■□□□ 1.49
LTBP3-212ENST00000529189 PFKMP08237 780 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 SETSIPP0DME0 302 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 ACRP10323 421 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 GGCXP38435 758 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 HSPA9P38646 679 aaKnown RBP24.38■■□□□ 1.49
LTBP3-212ENST00000529189 ZFYVE27Q5T4F4 411 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 CRIPAKQ8N1N5 446 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 C1orf54Q8WWF1 131 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 PAAF1Q9BRP4 392 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 DNAI2Q9GZS0 605 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 HESX1Q9UBX0 185 aa24.38■■□□□ 1.49
LTBP3-212ENST00000529189 AGPSO00116 658 aa24.37■■□□□ 1.49
LTBP3-212ENST00000529189 IGFBP6P24592 240 aaPredicted RBP24.37■■□□□ 1.49
LTBP3-212ENST00000529189 KLF1Q13351 362 aaPredicted RBP24.37■■□□□ 1.49
LTBP3-212ENST00000529189 KCTD19Q17RG1 926 aaPredicted RBP24.37■■□□□ 1.49
LTBP3-212ENST00000529189 COL13A1Q5TAT6 717 aaPredicted RBP24.37■■□□□ 1.49
LTBP3-212ENST00000529189 ABI1Q8IZP0 508 aa24.37■■□□□ 1.49
LTBP3-212ENST00000529189 KBTBD7Q8WVZ9 684 aa24.37■■□□□ 1.49
LTBP3-212ENST00000529189 LRRC45Q96CN5 670 aa24.37■■□□□ 1.49
LTBP3-212ENST00000529189 HEMGNQ9BXL5 484 aa24.37■■□□□ 1.49
LTBP3-212ENST00000529189 DCLK3Q9C098 648 aa24.37■■□□□ 1.49
LTBP3-212ENST00000529189 SNX25Q9H3E2 840 aa24.37■■□□□ 1.49
LTBP3-212ENST00000529189 HOMER3Q9NSC5 361 aa24.37■■□□□ 1.49
LTBP3-212ENST00000529189 FAM49BQ9NUQ9 324 aa24.37■■□□□ 1.49
LTBP3-212ENST00000529189 KLHL11Q9NVR0 708 aa24.37■■□□□ 1.49
LTBP3-212ENST00000529189 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.37■■□□□ 1.49
LTBP3-212ENST00000529189 ECEL1O95672 775 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 GBP1P32455 592 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 TUSC3Q13454 348 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 PKDCCQ504Y2 493 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 FAM102AQ5T9C2 384 aaPredicted RBP24.36■■□□□ 1.49
LTBP3-212ENST00000529189 ARHGAP17Q68EM7 881 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 POLNQ7Z5Q5 900 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 NPAS4Q8IUM7 802 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 APPL2Q8NEU8 664 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 SLCO2A1Q92959 643 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 RNF25Q96BH1 459 aaPredicted RBP24.36■■□□□ 1.49
LTBP3-212ENST00000529189 SLITRK1Q96PX8 696 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 RUFY1Q96T51 708 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 TBC1D13Q9NVG8 400 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 B4GALT3O60512 393 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 GNL1P36915 607 aaPredicted RBP24.36■■□□□ 1.49
LTBP3-212ENST00000529189 KCNJ1P48048 391 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 COPS2P61201 443 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 ATP13A4Q4VNC1 1196 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 ODF2Q5BJF6 829 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 CFAP58Q5T655 872 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 LIMS2Q7Z4I7 341 aa24.36■■□□□ 1.49
LTBP3-212ENST00000529189 TTC30AQ86WT1 665 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms