RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 LIMK1P53667 647 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 TRPC3Q13507 836 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 PSMD6Q15008 389 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 MDH1BQ5I0G3 518 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 XXYLT1Q8NBI6 393 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 GLIS3Q8NEA6 775 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 ZNF507Q8TCN5 953 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 HPS3Q969F9 1004 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 PCED1BQ96HM7 432 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 HHIPQ96QV1 700 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 SLC22A12Q96S37 553 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 CYP2S1Q96SQ9 504 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 ELOVL4Q9GZR5 314 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 ARRDC1-AS1Q9H2J1 176 aa16.68■□□□□ 0.26
CTSB-215ENST00000528965 CGNQ9P2M7 1197 aaKnown RBP16.68■□□□□ 0.26
CTSB-215ENST00000528965 SLC9A3R1O14745 358 aaPredicted RBP16.67■□□□□ 0.26
CTSB-215ENST00000528965 RHOBTB1O94844 696 aa16.67■□□□□ 0.26
CTSB-215ENST00000528965 ZNF806P0C7X5 589 aa16.67■□□□□ 0.26
CTSB-215ENST00000528965 PDIA4P13667 645 aaKnown RBP16.67■□□□□ 0.26
CTSB-215ENST00000528965 GNL1P36915 607 aaPredicted RBP16.67■□□□□ 0.26
CTSB-215ENST00000528965 CYP2J2P51589 502 aa16.67■□□□□ 0.26
CTSB-215ENST00000528965 NOP14P78316 857 aaKnown RBP16.67■□□□□ 0.26
CTSB-215ENST00000528965 CYP24A1Q07973 514 aa16.67■□□□□ 0.26
CTSB-215ENST00000528965 DMC1Q14565 340 aa16.67■□□□□ 0.26
CTSB-215ENST00000528965 UNC13DQ70J99 1090 aa16.67■□□□□ 0.26
CTSB-215ENST00000528965 EPM2AIP1Q7L775 607 aaPredicted RBP16.67■□□□□ 0.26
CTSB-215ENST00000528965 KBTBD6Q86V97 674 aa16.67■□□□□ 0.26
CTSB-215ENST00000528965 C11orf74Q86VG3 221 aa16.67■□□□□ 0.26
CTSB-215ENST00000528965 DDX42Q86XP3 938 aaKnown RBP eCLIP16.67■□□□□ 0.26
CTSB-215ENST00000528965 OR6B3Q8NGW1 331 aa16.67■□□□□ 0.26
CTSB-215ENST00000528965 CCDC127Q96BQ5 260 aa16.67■□□□□ 0.26
CTSB-215ENST00000528965 C8orf48Q96LL4 319 aa16.67■□□□□ 0.26
CTSB-215ENST00000528965 SLITRK1Q96PX8 696 aa16.67■□□□□ 0.26
CTSB-215ENST00000528965 C7orf25Q9BPX7 421 aa16.67■□□□□ 0.26
CTSB-215ENST00000528965 TTLL2Q9BWV7 592 aa16.67■□□□□ 0.26
CTSB-215ENST00000528965 ATP8B3O60423 1300 aa16.67■□□□□ 0.26
CTSB-215ENST00000528965 TPRP12270 2363 aaKnown RBP16.66■□□□□ 0.26
CTSB-215ENST00000528965 F8VP50 259 aa16.66■□□□□ 0.26
CTSB-215ENST00000528965 CLSTN1O94985 981 aa16.66■□□□□ 0.26
CTSB-215ENST00000528965 KCNA4P22459 653 aa16.66■□□□□ 0.26
CTSB-215ENST00000528965 HOXD13P35453 343 aa16.66■□□□□ 0.26
CTSB-215ENST00000528965 MPLP40238 635 aa16.66■□□□□ 0.26
CTSB-215ENST00000528965 SLC7A9P82251 487 aa16.66■□□□□ 0.26
CTSB-215ENST00000528965 WDR72Q3MJ13 1102 aa16.66■□□□□ 0.26
CTSB-215ENST00000528965 TDRD10Q5VZ19 366 aaKnown RBP16.66■□□□□ 0.26
CTSB-215ENST00000528965 SCARA3Q6AZY7 606 aa16.66■□□□□ 0.26
CTSB-215ENST00000528965 NELFCDQ8IXH7 590 aa16.66■□□□□ 0.26
CTSB-215ENST00000528965 RDH13Q8NBN7 331 aa16.66■□□□□ 0.26
CTSB-215ENST00000528965 TSTD1Q8NFU3 115 aa16.66■□□□□ 0.26
CTSB-215ENST00000528965 GOLGA5Q8TBA6 731 aa16.66■□□□□ 0.26
CTSB-215ENST00000528965 SYAP1Q96A49 352 aaPredicted RBP16.66■□□□□ 0.26
CTSB-215ENST00000528965 ZC3H10Q96K80 434 aaKnown RBP16.66■□□□□ 0.26
CTSB-215ENST00000528965 MRPL45Q9BRJ2 306 aaKnown RBP16.66■□□□□ 0.26
CTSB-215ENST00000528965 FBRSL1Q9HCM7 1045 aaKnown RBP16.66■□□□□ 0.26
CTSB-215ENST00000528965 VPS45Q9NRW7 570 aa16.66■□□□□ 0.26
CTSB-215ENST00000528965 FAM13BQ9NYF5 915 aa16.66■□□□□ 0.26
CTSB-215ENST00000528965 EBF1Q9UH73 591 aa16.66■□□□□ 0.26
CTSB-215ENST00000528965 RALGAPA1Q6GYQ0 2036 aa16.65■□□□□ 0.26
CTSB-215ENST00000528965 ZNF840PA6NDX5 716 aa16.65■□□□□ 0.26
CTSB-215ENST00000528965 LEFTY2O00292 366 aa16.65■□□□□ 0.26
CTSB-215ENST00000528965 GDF9O60383 454 aa16.65■□□□□ 0.26
CTSB-215ENST00000528965 PHACTR2O75167 634 aa16.65■□□□□ 0.26
CTSB-215ENST00000528965 STAU1O95793 577 aaKnown RBP16.65■□□□□ 0.26
CTSB-215ENST00000528965 HOXC13P31276 330 aa16.65■□□□□ 0.26
CTSB-215ENST00000528965 ATICP31939 592 aa16.65■□□□□ 0.26
CTSB-215ENST00000528965 NAIF1Q69YI7 327 aaPredicted RBP16.65■□□□□ 0.26
CTSB-215ENST00000528965 HSCBQ8IWL3 235 aa16.65■□□□□ 0.26
CTSB-215ENST00000528965 PDZD8Q8NEN9 1154 aa16.65■□□□□ 0.26
CTSB-215ENST00000528965 CNTNAP3BQ96NU0 1288 aa16.65■□□□□ 0.26
CTSB-215ENST00000528965 CNTNAP3Q9BZ76 1288 aa16.65■□□□□ 0.26
CTSB-215ENST00000528965 SPAG17Q6Q759 2223 aa16.65■□□□□ 0.26
CTSB-215ENST00000528965 ACACBO00763 2458 aa16.64■□□□□ 0.26
CTSB-215ENST00000528965 HELZP42694 1942 aaKnown RBP16.64■□□□□ 0.26
CTSB-215ENST00000528965 PVALEFA0A1B0GWK0 134 aa16.64■□□□□ 0.25
CTSB-215ENST00000528965 A8MXQ7 604 aa16.64■□□□□ 0.25
CTSB-215ENST00000528965 CLIC2O15247 247 aa16.64■□□□□ 0.25
CTSB-215ENST00000528965 TGFB1I1O43294 461 aa16.64■□□□□ 0.25
CTSB-215ENST00000528965 EXOC3O60645 756 aa16.64■□□□□ 0.25
CTSB-215ENST00000528965 RTN3O95197 1032 aaPredicted RBP16.64■□□□□ 0.25
CTSB-215ENST00000528965 ADH1CP00326 375 aa16.64■□□□□ 0.25
CTSB-215ENST00000528965 ABL1P00519 1130 aa16.64■□□□□ 0.25
CTSB-215ENST00000528965 PTPN1P18031 435 aaKnown RBP16.64■□□□□ 0.25
CTSB-215ENST00000528965 AP3M2P53677 418 aa16.64■□□□□ 0.25
CTSB-215ENST00000528965 USP46P62068 366 aa16.64■□□□□ 0.25
CTSB-215ENST00000528965 SF3A2Q15428 464 aaKnown RBP16.64■□□□□ 0.25
CTSB-215ENST00000528965 BMT2Q1RMZ1 405 aa16.64■□□□□ 0.25
CTSB-215ENST00000528965 PLK5Q496M5 336 aa16.64■□□□□ 0.25
CTSB-215ENST00000528965 SHC4Q6S5L8 630 aa16.64■□□□□ 0.25
CTSB-215ENST00000528965 C12orf56Q8IXR9 622 aa16.64■□□□□ 0.25
CTSB-215ENST00000528965 SCFD1Q8WVM8 642 aa16.64■□□□□ 0.25
CTSB-215ENST00000528965 TFIP11Q9UBB9 837 aaKnown RBP16.64■□□□□ 0.25
CTSB-215ENST00000528965 GREB1Q4ZG55 1949 aa16.64■□□□□ 0.25
CTSB-215ENST00000528965 POLR2DO15514 142 aaKnown RBP16.63■□□□□ 0.25
CTSB-215ENST00000528965 OLFM2O95897 454 aa16.63■□□□□ 0.25
CTSB-215ENST00000528965 OAS1P00973 400 aaKnown RBP16.63■□□□□ 0.25
CTSB-215ENST00000528965 ME1P48163 572 aa16.63■□□□□ 0.25
CTSB-215ENST00000528965 DGKEP52429 567 aa16.63■□□□□ 0.25
CTSB-215ENST00000528965 IFRD2Q12894 506 aaPredicted RBP16.63■□□□□ 0.25
CTSB-215ENST00000528965 BIRC3Q13489 604 aa16.63■□□□□ 0.25
CTSB-215ENST00000528965 ZNF699Q32M78 642 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms