RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 TXNDC8Q6A555 127 aa14.19□□□□□ -0.14
CAPN1-215ENST00000528396 MON1AQ86VX9 555 aa14.19□□□□□ -0.14
CAPN1-215ENST00000528396 CMTM8Q8IZV2 173 aa14.19□□□□□ -0.14
CAPN1-215ENST00000528396 FUKQ8N0W3 1084 aa14.19□□□□□ -0.14
CAPN1-215ENST00000528396 NUP93Q8N1F7 819 aa14.19□□□□□ -0.14
CAPN1-215ENST00000528396 PPM1KQ8N3J5 372 aa14.19□□□□□ -0.14
CAPN1-215ENST00000528396 IRF7Q92985 503 aa14.19□□□□□ -0.14
CAPN1-215ENST00000528396 JAKMIP2Q96AA8 810 aa14.19□□□□□ -0.14
CAPN1-215ENST00000528396 CYFIP2Q96F07 1278 aa14.19□□□□□ -0.14
CAPN1-215ENST00000528396 TWNKQ96RR1 684 aa14.19□□□□□ -0.14
CAPN1-215ENST00000528396 ARID3AQ99856 593 aa14.19□□□□□ -0.14
CAPN1-215ENST00000528396 THAP9Q9H5L6 903 aa14.19□□□□□ -0.14
CAPN1-215ENST00000528396 THG1LQ9NWX6 298 aaKnown RBP14.19□□□□□ -0.14
CAPN1-215ENST00000528396 SOBPA7XYQ1 873 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 PES1O00541 588 aaKnown RBP14.18□□□□□ -0.14
CAPN1-215ENST00000528396 PDGFBP01127 241 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-215ENST00000528396 USP17L7P0C7H9 530 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 CD19P15391 556 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 COL9A1P20849 921 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 YWHAQP27348 245 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 PPP3CCP48454 512 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 CACNA2D1P54289 1103 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 MAP3K7CLP57077 242 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 VITQ6UXI7 678 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 MFSD6LQ8IWD5 586 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 CELF5Q8N6W0 485 aaKnown RBP14.18□□□□□ -0.14
CAPN1-215ENST00000528396 EHBP1Q8NDI1 1231 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 CSGALNACT1Q8TDX6 532 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 FBXO32Q969P5 355 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 TMEM176AQ96HP8 235 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 KCNK16Q96T55 309 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 HNRNPABQ99729 332 aaKnown RBP14.18□□□□□ -0.14
CAPN1-215ENST00000528396 SLC46A2Q9BY10 475 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 PLA2G2FQ9BZM2 168 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 SMG9Q9H0W8 520 aaKnown RBP14.18□□□□□ -0.14
CAPN1-215ENST00000528396 ANO10Q9NW15 660 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 GCNT4Q9P109 453 aa14.18□□□□□ -0.14
CAPN1-215ENST00000528396 PRKCSHP14314 528 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-215ENST00000528396 WEE1P30291 646 aa14.17□□□□□ -0.14
CAPN1-215ENST00000528396 SLC5A3P53794 718 aa14.17□□□□□ -0.14
CAPN1-215ENST00000528396 USP46P62068 366 aa14.17□□□□□ -0.14
CAPN1-215ENST00000528396 TAF10Q12962 218 aa14.17□□□□□ -0.14
CAPN1-215ENST00000528396 STX1AQ16623 288 aa14.17□□□□□ -0.14
CAPN1-215ENST00000528396 CC2D1AQ6P1N0 951 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-215ENST00000528396 POTEHQ6S545 545 aa14.17□□□□□ -0.14
CAPN1-215ENST00000528396 TMEM150AQ86TG1 271 aa14.17□□□□□ -0.14
CAPN1-215ENST00000528396 PDZD8Q8NEN9 1154 aa14.17□□□□□ -0.14
CAPN1-215ENST00000528396 DNASE1L2Q92874 299 aa14.17□□□□□ -0.14
CAPN1-215ENST00000528396 TTLL2Q9BWV7 592 aa14.17□□□□□ -0.14
CAPN1-215ENST00000528396 INTS2Q9H0H0 1204 aaKnown RBP14.17□□□□□ -0.14
CAPN1-215ENST00000528396 TBC1D17Q9HA65 648 aa14.17□□□□□ -0.14
CAPN1-215ENST00000528396 KIF9Q9HAQ2 790 aa14.17□□□□□ -0.14
CAPN1-215ENST00000528396 TDP1Q9NUW8 608 aa14.17□□□□□ -0.14
CAPN1-215ENST00000528396 OBP2AQ9NY56 170 aa14.17□□□□□ -0.14
CAPN1-215ENST00000528396 HESX1Q9UBX0 185 aa14.17□□□□□ -0.14
CAPN1-215ENST00000528396 PCDHB4Q9Y5E5 795 aa14.17□□□□□ -0.14
CAPN1-215ENST00000528396 PRAMEF12O95522 483 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 TPM2P07951 284 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 NPR3P17342 541 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 HDCP19113 662 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 RAD23BP54727 409 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 PLCB2Q00722 1185 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 PRKCQQ04759 706 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 MLF2Q15773 248 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-215ENST00000528396 ARHGAP29Q52LW3 1261 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 SLC44A4Q53GD3 710 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 SGO2Q562F6 1265 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 HSP90AA4PQ58FG1 418 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 ASTLQ6HA08 431 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-215ENST00000528396 TMEM270Q6UE05 265 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 GBP6Q6ZN66 633 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 PAQR9Q6ZVX9 377 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 RRAGAQ7L523 313 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 SLC4A11Q8NBS3 891 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 BPIFB1Q8TDL5 484 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 WHAMMQ8TF30 809 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 SMOQ99835 787 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 NACA2Q9H009 215 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 FBXO44Q9H4M3 255 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 TMEM30AQ9NV96 361 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 COMMD8Q9NX08 183 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 RAPGEFL1Q9UHV5 662 aa14.16□□□□□ -0.14
CAPN1-215ENST00000528396 PTPRDP23468 1912 aa14.15□□□□□ -0.14
CAPN1-215ENST00000528396 KRBA1A5PL33 1030 aa14.15□□□□□ -0.14
CAPN1-215ENST00000528396 TADA3O75528 432 aa14.15□□□□□ -0.14
CAPN1-215ENST00000528396 PTMSP20962 102 aa14.15□□□□□ -0.14
CAPN1-215ENST00000528396 KPNA1P52294 538 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-215ENST00000528396 GCNT1Q02742 428 aa14.15□□□□□ -0.14
CAPN1-215ENST00000528396 MAN2A1Q16706 1144 aa14.15□□□□□ -0.14
CAPN1-215ENST00000528396 PPP1R26Q5T8A7 1209 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-215ENST00000528396 CLEC20AQ6ZU45 233 aa14.15□□□□□ -0.14
CAPN1-215ENST00000528396 TPRG1Q6ZUI0 275 aa14.15□□□□□ -0.14
CAPN1-215ENST00000528396 ARL14EPQ8N8R7 260 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-215ENST00000528396 ANKRD20A12PQ8NF67 263 aa14.15□□□□□ -0.14
CAPN1-215ENST00000528396 SCAMP5Q8TAC9 235 aa14.15□□□□□ -0.14
CAPN1-215ENST00000528396 OVCA2Q8WZ82 227 aa14.15□□□□□ -0.14
CAPN1-215ENST00000528396 USP13Q92995 863 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-215ENST00000528396 RSPRY1Q96DX4 576 aa14.15□□□□□ -0.14
CAPN1-215ENST00000528396 FAM81BQ96LP2 452 aa14.15□□□□□ -0.14
CAPN1-215ENST00000528396 MED15Q96RN5 788 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms