RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ANHXE9PGG2 379 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 PI4K2BG5E9Z4 385 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 M0QYV0 167 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 USP17L7P0C7H9 530 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 SETSIPP0DME0 302 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 SRFP11831 508 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 HMGA1P17096 107 aaKnown RBP5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 PFKLP17858 780 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 CCR2P41597 374 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 SLC5A3P53794 718 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 BPIFB4P59827 614 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZXDAP98168 799 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 CYP4F8P98187 520 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 GOLGA8FQ08AF8 430 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 SIGLEC14Q08ET2 396 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 GOLGA8DPQ0D2H9 430 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 BST2Q10589 180 aaKnown RBP5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 RAPGEF1Q13905 1077 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 KRT31Q15323 416 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 ARHGAP44Q17R89 818 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZSCAN23Q3MJ62 389 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 FAM78AQ5JUQ0 283 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 TMEM31Q5JXX7 168 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 PPP1R26Q5T8A7 1209 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 CDKAL1Q5VV42 579 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 ARHGAP17Q68EM7 881 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 CC2D1AQ6P1N0 951 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 PARM1Q6UWI2 310 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 GAREM2Q75VX8 874 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 TADA2BQ86TJ2 420 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 MON1AQ86VX9 555 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 DDX42Q86XP3 938 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 IRF2BP1Q8IU81 584 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 FMNL3Q8IVF7 1028 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 ARHGEF19Q8IW93 802 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 SUGP1Q8IWZ8 645 aaKnown RBP5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 SIX6OS1Q8N1H7 587 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 ARHGAP18Q8N392 663 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 CELF5Q8N6W0 485 aaKnown RBP5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 MAB21L3Q8N8X9 362 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 ANKRD52Q8NB46 1076 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 SLC4A11Q8NBS3 891 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 TTC16Q8NEE8 873 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 FEZF2Q8TBJ5 459 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 DEPDC1BQ8WUY9 529 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 GOLGA1Q92805 767 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 EDAQ92838 391 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 ASB16Q96NS5 453 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 TWNKQ96RR1 684 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 CDK5RAP1Q96SZ6 601 aaKnown RBP5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 TRMT61BQ9BVS5 477 aaKnown RBP5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 TTLL2Q9BWV7 592 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 LSM14BQ9BX40 385 aaKnown RBP5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 LRRC3Q9BY71 257 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 DUSP16Q9BY84 665 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 VPS16Q9H269 839 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 PDCL3Q9H2J4 239 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 BRD9Q9H8M2 597 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 TRPV4Q9HBA0 871 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 LRRC4Q9HBW1 653 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 CD320Q9NPF0 282 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 TLR8Q9NR97 1041 aaKnown RBP5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 DUSP12Q9UNI6 340 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 DAAM1Q9Y4D1 1078 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 NME7Q9Y5B8 376 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 NCANO14594 1321 aa5.71□□□□□ -1.5
HMGB1P40-201ENST00000525121 TMEM221A6NGB7 291 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 LGALS16A8MUM7 142 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 HEPACAM2A8MVW5 462 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 M0R296 226 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 O00370 1275 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 STK25O00506 426 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZNF263O14978 683 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 XPO1O14980 1071 aaKnown RBP5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 SART1O43290 800 aaKnown RBP5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 THAP12O43422 761 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 LRRN2O75325 713 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 SERPINC1P01008 464 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 F11P03951 625 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 TPM3P06753 285 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 CFHP08603 1231 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 RALAP11233 206 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 PSMC3P17980 439 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 HDCP19113 662 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 SLC9A1P19634 815 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 ACO1P21399 889 aaKnown RBP5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 BRD2P25440 801 aaKnown RBP5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 PON1P27169 355 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 WEE1P30291 646 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 GNA15P30679 374 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 KRT9P35527 623 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 PSEN1P49768 467 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 TUBP50607 506 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 COPB1P53618 953 aaKnown RBP5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 CACNA2D1P54289 1103 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 SNX16P57768 344 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 PLCB2Q00722 1185 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 UBXN1Q04323 297 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 PTK2Q05397 1052 aa5.7□□□□□ -1.5
HMGB1P40-201ENST00000525121 TAF10Q12962 218 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms