RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 E4F1Q66K89 784 aaPredicted RBP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 TXNDC8Q6A555 127 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 ELMSAN1Q6PJG2 1045 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 GAREM2Q75VX8 874 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 PDZD4Q76G19 769 aaPredicted RBP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 CACNA2D4Q7Z3S7 1137 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 TMEM150AQ86TG1 271 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 NOP9Q86U38 636 aaKnown RBP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 TMC8Q8IU68 726 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 NPAS3Q8IXF0 933 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 ELMOD1Q8N336 334 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 MAB21L3Q8N8X9 362 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 TTC8Q8TAM2 541 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 CLEC4CQ8WTT0 213 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 HDAC7Q8WUI4 952 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 ATXN2LQ8WWM7 1075 aaKnown RBP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 SHC3Q92529 594 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 SUSD6Q92537 303 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 FGF13Q92913 245 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 KHSRPQ92945 711 aaKnown RBP eCLIP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 SECISBP2LQ93073 1101 aaKnown RBP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 SMARCD1Q96GM5 515 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 RIPOR3Q96MK2 946 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 SPAG5Q96R06 1193 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 SLC22A12Q96S37 553 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 HNRNPABQ99729 332 aaKnown RBP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 KXD1Q9BQD3 176 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 NAA15Q9BXJ9 866 aaKnown RBP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 LRRC3Q9BY71 257 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 OXCT2Q9BYC2 517 aaPredicted RBP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 SLITRK6Q9H5Y7 841 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 IL21Q9HBE4 155 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 WDR6Q9NNW5 1121 aaKnown RBP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 DMAP1Q9NPF5 467 aaPredicted RBP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 ST7Q9NRC1 585 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 GMIPQ9P107 970 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 LIMD1Q9UGP4 676 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 CYTH4Q9UIA0 394 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 NCANO14594 1321 aa4.87□□□□□ -1.63
CHMP4A-202ENST00000524955 XIRP2A4UGR9 3374 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 TRANK1O15050 2925 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 A0A1W2PQH9 124 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 LRRC53A6NM62 1247 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 TMCO5BA8MYB1 307 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 TNFRSF10BO14763 440 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 TRIM66O15016 1216 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 NARSO43776 548 aaKnown RBP4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 GJB6O95452 261 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 PRAMEF12O95522 483 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 TBX18O95935 607 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 F11P03951 625 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 HMBSP08397 361 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 PAEPP09466 180 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 FAM163BP0C2L3 166 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 USP17L7P0C7H9 530 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 CSH1P0DML2 217 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 CSH2P0DML3 217 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 IRF1P10914 325 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 CYP11B1P15538 503 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 NPR3P17342 541 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 CHRNB2P17787 502 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 TRIM21P19474 475 aaKnown RBP4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 HOXA9P31269 272 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 SOX5P35711 763 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 PBX1P40424 430 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 STAT1P42224 750 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 MAGEA11P43364 429 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 TKTL1P51854 596 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 JAM2P57087 298 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 PTK2Q05397 1052 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 ZP2Q05996 745 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 ADIGQ0VDE8 80 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 SMARCB1Q12824 385 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 TAF10Q12962 218 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 GRM2Q14416 872 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 TAF5Q15542 800 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 SMAD2Q15796 467 aaKnown RBP4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 CNGA2Q16280 664 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 AAK1Q2M2I8 961 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 TJAP1Q5JTD0 557 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 FAM78AQ5JUQ0 283 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 PRSS36Q5K4E3 855 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 ARHGAP17Q68EM7 881 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 TANGO2Q6ICL3 276 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 PMF1Q6P1K2 205 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 PARM1Q6UWI2 310 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 VSTM1Q6UX27 236 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 DENND5BQ6ZUT9 1274 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 HFE2Q6ZVN8 426 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 TMC6Q7Z403 805 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 PIGZQ86VD9 579 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 FAM71AQ8IYT1 594 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 NUP93Q8N1F7 819 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 WDTC1Q8N5D0 677 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 ARL14EPQ8N8R7 260 aaPredicted RBP4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 TDRD5Q8NAT2 981 aaKnown RBP4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 ANKRD52Q8NB46 1076 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 C1orf131Q8NDD1 294 aaKnown RBP4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 CMASQ8NFW8 434 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms