RNA–Protein interactions for RNA: ENST00000524654.1

CTSB-207, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-207ENST00000524654 MRPS17Q9Y2R5 130 aaKnown RBP11.68□□□□□ -0.54
CTSB-207ENST00000524654 C2orf78A6NCI8 922 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 PPP1R3GB7ZBB8 358 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 NCAM2O15394 837 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 STX10O60499 249 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 CCNE1P24864 410 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 MAGEA9P43362 315 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 MORC3Q14149 939 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 ISM2Q6H9L7 571 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 FOXR2Q6PJQ5 311 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 FAM35AQ86V20 835 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 MAML2Q8IZL2 1156 aaPredicted RBP11.67□□□□□ -0.54
CTSB-207ENST00000524654 FBXL13Q8NEE6 735 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 CSGALNACT1Q8TDX6 532 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 WHAMMQ8TF30 809 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 FAM3CQ92520 227 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 SEMA4DQ92854 862 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 MSANTD3Q96H12 275 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 FAXDC2Q96IV6 333 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 NIF3L1Q9GZT8 377 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 C8orf33Q9H7E9 229 aaPredicted RBP11.67□□□□□ -0.54
CTSB-207ENST00000524654 MMRN2Q9H8L6 949 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 TRPC7Q9HCX4 862 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.67□□□□□ -0.54
CTSB-207ENST00000524654 THG1LQ9NWX6 298 aaKnown RBP11.67□□□□□ -0.54
CTSB-207ENST00000524654 GTSE1Q9NYZ3 720 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 IL37Q9NZH6 218 aa11.67□□□□□ -0.54
CTSB-207ENST00000524654 COL4A2P08572 1712 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 TRAV19A0A0A6YYK7 116 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 ZNF840PA6NDX5 716 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 SPECC1L-ADORA2AF8WAN1 911 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 TNFRSF10BO14763 440 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 PSMA7O14818 248 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 USP17L7P0C7H9 530 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 PFKLP17858 780 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 PPP1R2P41236 205 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 SOX9P48436 509 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 PPP3CCP48454 512 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 MXI1P50539 228 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 UBE2HP62256 183 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 TNK2Q07912 1038 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 ORC1Q13415 861 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 STIM1Q13586 685 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 CBWD6Q4V339 395 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 CBWD3Q5JTY5 395 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 CBWD5Q5RIA9 395 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 TTI2Q6NXR4 508 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 C1orf228Q6PIY5 440 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 RALGPS2Q86X27 583 aaPredicted RBP11.66□□□□□ -0.54
CTSB-207ENST00000524654 NUP93Q8N1F7 819 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 ARL14EPQ8N8R7 260 aaPredicted RBP11.66□□□□□ -0.54
CTSB-207ENST00000524654 C12orf29Q8N999 325 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 SLC2A14Q8TDB8 520 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 SLC35C1Q96A29 364 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 SMARCD1Q96GM5 515 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 TWNKQ96RR1 684 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 DUSP9Q99956 384 aaKnown RBP11.66□□□□□ -0.54
CTSB-207ENST00000524654 CSNK1G1Q9HCP0 422 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 DMAP1Q9NPF5 467 aaPredicted RBP11.66□□□□□ -0.54
CTSB-207ENST00000524654 GKN1Q9NS71 199 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 RAB20Q9NX57 234 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 TRPM5Q9NZQ8 1165 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 NDRG2Q9UN36 371 aaKnown RBP11.66□□□□□ -0.54
CTSB-207ENST00000524654 COQ4Q9Y3A0 265 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 TCHHQ07283 1943 aa11.66□□□□□ -0.54
CTSB-207ENST00000524654 ATP8B3O60423 1300 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 FAM92AA1XBS5 289 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 OTOL1A6NHN0 477 aaPredicted RBP11.65□□□□□ -0.54
CTSB-207ENST00000524654 CILPO75339 1184 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 AP1G2O75843 785 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 BEST1O76090 585 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 RTN3O95197 1032 aaPredicted RBP11.65□□□□□ -0.54
CTSB-207ENST00000524654 OLFM2O95897 454 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 CKMP06732 381 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 CHRNB1P11230 501 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 CCDC130P13994 396 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 TCF3P15923 654 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 HDCP19113 662 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 CTHP32929 405 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 PDE6CP51160 858 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 KPNA1P52294 538 aaPredicted RBP11.65□□□□□ -0.54
CTSB-207ENST00000524654 ZXDBP98169 803 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 TAF10Q12962 218 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 USP4Q13107 963 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 ZNF77Q15935 545 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 ITPRIPL2Q3MIP1 535 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 DCAF17Q5H9S7 520 aaPredicted RBP11.65□□□□□ -0.54
CTSB-207ENST00000524654 WDR44Q5JSH3 913 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 TXNDC11Q6PKC3 985 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 MAMSTRQ6ZN01 415 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 FILIP1Q7Z7B0 1213 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 CCDC150Q8NCX0 1101 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 ZMIZ2Q8NF64 920 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 TTC8Q8TAM2 541 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 OVCA2Q8WZ82 227 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 CHFRQ96EP1 664 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 CEP63Q96MT8 703 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 SLITRK1Q96PX8 696 aa11.65□□□□□ -0.54
CTSB-207ENST00000524654 HNRNPABQ99729 332 aaKnown RBP11.65□□□□□ -0.54
CTSB-207ENST00000524654 SMOQ99835 787 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms