RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 RBM23Q86U06 439 aaKnown RBP9.86□□□□□ -0.83
SDCBP-212ENST00000523483 SMARCD1Q96GM5 515 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 ISCUQ9H1K1 167 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 RC3H2Q9HBD1 1191 aaKnown RBP9.86□□□□□ -0.83
SDCBP-212ENST00000523483 CYP4F11Q9HBI6 524 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 METTL5Q9NRN9 209 aaKnown RBP9.86□□□□□ -0.83
SDCBP-212ENST00000523483 TMEM30AQ9NV96 361 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 PCDHGC3Q9UN70 934 aa9.86□□□□□ -0.83
SDCBP-212ENST00000523483 SOD2P04179 222 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 CALB1P05937 261 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 MMP8P22894 467 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 SMC1AQ14683 1233 aaKnown RBP9.85□□□□□ -0.83
SDCBP-212ENST00000523483 RNF19BQ6ZMZ0 732 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 PAQR9Q6ZVX9 377 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 GIPC2Q8TF65 315 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 DUSP16Q9BY84 665 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 COG5Q9UP83 839 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 PDCD11Q14690 1871 aaKnown RBP9.85□□□□□ -0.83
SDCBP-212ENST00000523483 H7C4K7 107 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 MYO1FO00160 1098 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 PRRG1O14668 218 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 SPOPO43791 374 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 URI1O94763 535 aaPredicted RBP9.85□□□□□ -0.83
SDCBP-212ENST00000523483 OAZ2O95190 189 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 KRT3P12035 628 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 FGFR3P22607 806 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 CASQ1P31415 396 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 CXCR5P32302 372 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 TKTL1P51854 596 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 ROR1Q01973 937 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 MAPRE1Q15691 268 aaKnown RBP9.85□□□□□ -0.83
SDCBP-212ENST00000523483 CHRDL2Q6WN34 429 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 MON1BQ7L1V2 547 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 SCAMP5Q8TAC9 235 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 HNRNPABQ99729 332 aaKnown RBP9.85□□□□□ -0.83
SDCBP-212ENST00000523483 EYSQ5T1H1 3165 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 CXCL14O95715 111 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 USP17L7P0C7H9 530 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 ELF1P32519 619 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 ETF1P62495 437 aaKnown RBP9.85□□□□□ -0.83
SDCBP-212ENST00000523483 HTRA4P83105 476 aaPredicted RBP9.85□□□□□ -0.83
SDCBP-212ENST00000523483 ATP11AP98196 1134 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 NFE2Q16621 373 aaPredicted RBP9.85□□□□□ -0.83
SDCBP-212ENST00000523483 PPP2R2DQ66LE6 453 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 FAM183BPQ6ZVS7 135 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 POF1BQ8WVV4 589 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 SMOQ99835 787 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 SLC28A3Q9HAS3 691 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 DMAP1Q9NPF5 467 aaPredicted RBP9.85□□□□□ -0.83
SDCBP-212ENST00000523483 PCDHB5Q9Y5E4 795 aa9.85□□□□□ -0.83
SDCBP-212ENST00000523483 FNDC1Q4ZHG4 1894 aaPredicted RBP9.85□□□□□ -0.83
SDCBP-212ENST00000523483 CAPN9O14815 690 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 BUB1BO60566 1050 aaPredicted RBP9.84□□□□□ -0.83
SDCBP-212ENST00000523483 ARHGAP17Q68EM7 881 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 GPRIN1Q7Z2K8 1008 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 PEX26Q7Z412 305 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 CPNE8Q86YQ8 564 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 PHOSPHO2Q8TCD6 241 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 LHX5Q9H2C1 402 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 PARVAQ9NVD7 372 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 NUDT5Q9UKK9 219 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 UNC80Q8N2C7 3258 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 WDR27A2RRH5 827 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 ZNF500O60304 480 aaPredicted RBP9.84□□□□□ -0.83
SDCBP-212ENST00000523483 SETSIPP0DME0 302 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 BMPR1AP36894 532 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 LIMS2Q7Z4I7 341 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 RHOT2Q8IXI1 618 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 SLC35F5Q8WV83 523 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 TRIM11Q96F44 468 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 ULBP1Q9BZM6 244 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 NKX2-4Q9H2Z4 354 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 MRPL47Q9HD33 250 aaKnown RBP9.84□□□□□ -0.83
SDCBP-212ENST00000523483 STRIP2Q9ULQ0 834 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 ATP8B3O60423 1300 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 TNRC18O15417 2968 aaPredicted RBP9.84□□□□□ -0.83
SDCBP-212ENST00000523483 PER2O15055 1255 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 LPXNO60711 386 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 KLRC2P26717 231 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 RFC1P35251 1148 aaPredicted RBP9.84□□□□□ -0.83
SDCBP-212ENST00000523483 ERVFC1P60507 584 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 PLCB3Q01970 1234 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 C1QBPQ07021 282 aaKnown RBP9.84□□□□□ -0.83
SDCBP-212ENST00000523483 MAMLD1Q13495 774 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 IFI16Q16666 785 aaKnown RBP9.84□□□□□ -0.83
SDCBP-212ENST00000523483 PHF13Q86YI8 300 aaPredicted RBP9.84□□□□□ -0.83
SDCBP-212ENST00000523483 TRIM58Q8NG06 486 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 KIF18AQ8NI77 898 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 JOSD2Q8TAC2 188 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 EDEM1Q92611 657 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 CAPZA3Q96KX2 299 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 PBX4Q9BYU1 374 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 NGRNQ9NPE2 291 aaKnown RBP9.84□□□□□ -0.83
SDCBP-212ENST00000523483 YBX2Q9Y2T7 364 aaKnown RBP9.84□□□□□ -0.83
SDCBP-212ENST00000523483 PRUNE2Q8WUY3 3088 aa9.84□□□□□ -0.83
SDCBP-212ENST00000523483 C5orf42Q9H799 3197 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 MTMR11A4FU01 709 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 CTAGE9A4FU28 777 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 OR6C75A6NL08 312 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 PAPSS1O43252 624 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms