RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 FAM160A1Q05DH4 1040 aa19.89■□□□□ 0.77
SPIDR-220ENST00000522900 RUNX3Q13761 415 aa19.89■□□□□ 0.77
SPIDR-220ENST00000522900 ZNF268Q14587 947 aaPredicted RBP19.89■□□□□ 0.77
SPIDR-220ENST00000522900 PON2Q15165 354 aa19.89■□□□□ 0.77
SPIDR-220ENST00000522900 ZNF528Q3MIS6 628 aa19.89■□□□□ 0.77
SPIDR-220ENST00000522900 ACOT1Q86TX2 421 aa19.89■□□□□ 0.77
SPIDR-220ENST00000522900 ADSSL1Q8N142 457 aa19.89■□□□□ 0.77
SPIDR-220ENST00000522900 NUP210Q8TEM1 1887 aaPredicted RBP19.89■□□□□ 0.77
SPIDR-220ENST00000522900 CHFRQ96EP1 664 aa19.89■□□□□ 0.77
SPIDR-220ENST00000522900 MSANTD3Q96H12 275 aa19.89■□□□□ 0.77
SPIDR-220ENST00000522900 CEP295NLQ96MC4 621 aa19.89■□□□□ 0.77
SPIDR-220ENST00000522900 TTLL2Q9BWV7 592 aa19.89■□□□□ 0.77
SPIDR-220ENST00000522900 ELOVL4Q9GZR5 314 aa19.89■□□□□ 0.77
SPIDR-220ENST00000522900 KIF9Q9HAQ2 790 aa19.89■□□□□ 0.77
SPIDR-220ENST00000522900 APOBEC3GQ9HC16 384 aaKnown RBP19.89■□□□□ 0.77
SPIDR-220ENST00000522900 PRMT8Q9NR22 394 aaPredicted RBP19.89■□□□□ 0.77
SPIDR-220ENST00000522900 HMGXB4Q9UGU5 601 aa19.89■□□□□ 0.77
SPIDR-220ENST00000522900 CACNA1IQ9P0X4 2223 aa19.88■□□□□ 0.77
SPIDR-220ENST00000522900 MYO15AQ9UKN7 3530 aa19.88■□□□□ 0.77
SPIDR-220ENST00000522900 CKMP06732 381 aa19.88■□□□□ 0.77
SPIDR-220ENST00000522900 PIK3CAP42336 1068 aa19.88■□□□□ 0.77
SPIDR-220ENST00000522900 ASPAP45381 313 aa19.88■□□□□ 0.77
SPIDR-220ENST00000522900 NDST1P52848 882 aa19.88■□□□□ 0.77
SPIDR-220ENST00000522900 ZXDBP98169 803 aa19.88■□□□□ 0.77
SPIDR-220ENST00000522900 ZNF77Q15935 545 aa19.88■□□□□ 0.77
SPIDR-220ENST00000522900 INTS8Q75QN2 995 aaKnown RBP19.88■□□□□ 0.77
SPIDR-220ENST00000522900 TAS1R2Q8TE23 839 aa19.88■□□□□ 0.77
SPIDR-220ENST00000522900 TAF4BQ92750 862 aa19.88■□□□□ 0.77
SPIDR-220ENST00000522900 RNF38Q9H0F5 515 aa19.88■□□□□ 0.77
SPIDR-220ENST00000522900 MMRN2Q9H8L6 949 aa19.88■□□□□ 0.77
SPIDR-220ENST00000522900 TRPM5Q9NZQ8 1165 aa19.88■□□□□ 0.77
SPIDR-220ENST00000522900 PCDHA5Q9Y5H7 936 aa19.88■□□□□ 0.77
SPIDR-220ENST00000522900 ZNF840PA6NDX5 716 aa19.87■□□□□ 0.77
SPIDR-220ENST00000522900 LMNAP02545 664 aaKnown RBP19.87■□□□□ 0.77
SPIDR-220ENST00000522900 TDGF1P13385 188 aa19.87■□□□□ 0.77
SPIDR-220ENST00000522900 KRT13P13646 458 aa19.87■□□□□ 0.77
SPIDR-220ENST00000522900 IFRD2Q12894 506 aaPredicted RBP19.87■□□□□ 0.77
SPIDR-220ENST00000522900 TAF10Q12962 218 aa19.87■□□□□ 0.77
SPIDR-220ENST00000522900 MTF1Q14872 753 aa19.87■□□□□ 0.77
SPIDR-220ENST00000522900 EDRF1Q3B7T1 1238 aa19.87■□□□□ 0.77
SPIDR-220ENST00000522900 Q6ZS52 159 aa19.87■□□□□ 0.77
SPIDR-220ENST00000522900 FAM35AQ86V20 835 aa19.87■□□□□ 0.77
SPIDR-220ENST00000522900 FUKQ8N0W3 1084 aa19.87■□□□□ 0.77
SPIDR-220ENST00000522900 SH3RF2Q8TEC5 729 aa19.87■□□□□ 0.77
SPIDR-220ENST00000522900 NELL1Q92832 810 aa19.87■□□□□ 0.77
SPIDR-220ENST00000522900 CCDC34Q96HJ3 373 aa19.87■□□□□ 0.77
SPIDR-220ENST00000522900 MED10Q9BTT4 135 aa19.87■□□□□ 0.77
SPIDR-220ENST00000522900 LINC00597Q9H2U6 94 aa19.87■□□□□ 0.77
SPIDR-220ENST00000522900 SEMA4AQ9H3S1 761 aa19.87■□□□□ 0.77
SPIDR-220ENST00000522900 F5P12259 2224 aa19.86■□□□□ 0.77
SPIDR-220ENST00000522900 P4HA1P13674 534 aa19.86■□□□□ 0.77
SPIDR-220ENST00000522900 CCDC130P13994 396 aa19.86■□□□□ 0.77
SPIDR-220ENST00000522900 PMS1P54277 932 aaKnown RBP19.86■□□□□ 0.77
SPIDR-220ENST00000522900 MCCD1P59942 119 aaPredicted RBP19.86■□□□□ 0.77
SPIDR-220ENST00000522900 USP4Q13107 963 aa19.86■□□□□ 0.77
SPIDR-220ENST00000522900 ZNF658Q5TYW1 1059 aaPredicted RBP19.86■□□□□ 0.77
SPIDR-220ENST00000522900 NAIF1Q69YI7 327 aaPredicted RBP19.86■□□□□ 0.77
SPIDR-220ENST00000522900 CC2D1AQ6P1N0 951 aaPredicted RBP19.86■□□□□ 0.77
SPIDR-220ENST00000522900 C1orf228Q6PIY5 440 aa19.86■□□□□ 0.77
SPIDR-220ENST00000522900 ZC3H14Q6PJT7 736 aaKnown RBP19.86■□□□□ 0.77
SPIDR-220ENST00000522900 MAMSTRQ6ZN01 415 aa19.86■□□□□ 0.77
SPIDR-220ENST00000522900 CRYBG2Q8N1P7 616 aa19.86■□□□□ 0.77
SPIDR-220ENST00000522900 C12orf29Q8N999 325 aa19.86■□□□□ 0.77
SPIDR-220ENST00000522900 SCAMP5Q8TAC9 235 aa19.86■□□□□ 0.77
SPIDR-220ENST00000522900 SPATA20Q8TB22 786 aa19.86■□□□□ 0.77
SPIDR-220ENST00000522900 TNIP3Q96KP6 325 aa19.86■□□□□ 0.77
SPIDR-220ENST00000522900 GSDMAQ96QA5 445 aa19.86■□□□□ 0.77
SPIDR-220ENST00000522900 TWNKQ96RR1 684 aa19.86■□□□□ 0.77
SPIDR-220ENST00000522900 RMND1Q9NWS8 449 aa19.86■□□□□ 0.77
SPIDR-220ENST00000522900 C2orf42Q9NWW7 574 aa19.86■□□□□ 0.77
SPIDR-220ENST00000522900 WNT6Q9Y6F9 365 aa19.86■□□□□ 0.77
SPIDR-220ENST00000522900 DENND4CQ5VZ89 1909 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 TNFRSF10BO14763 440 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 BEST1O76090 585 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 ABL1P00519 1130 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 HOXC13P31276 330 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 SATB1Q01826 763 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 CCINQ13939 588 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 LRRC32Q14392 662 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 PDGFRLQ15198 375 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 ANKRD40Q6AI12 368 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 ISM2Q6H9L7 571 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 NUP93Q8N1F7 819 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 ZBTB44Q8NCP5 570 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 ZMIZ2Q8NF64 920 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 OSCP1Q8WVF1 389 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 SEMA4DQ92854 862 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 SMOQ99835 787 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 FBRSL1Q9HCM7 1045 aaKnown RBP19.85■□□□□ 0.77
SPIDR-220ENST00000522900 FAM49BQ9NUQ9 324 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 ZSCAN32Q9NX65 697 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 DUS2Q9NX74 493 aaKnown RBP19.85■□□□□ 0.77
SPIDR-220ENST00000522900 CHORDC1Q9UHD1 332 aaPredicted RBP19.85■□□□□ 0.77
SPIDR-220ENST00000522900 ARHGAP26Q9UNA1 814 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 OBSL1O75147 1896 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 PATJQ8NI35 1801 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 WDR87Q6ZQQ6 2873 aa19.85■□□□□ 0.77
SPIDR-220ENST00000522900 AP1G2O75843 785 aa19.84■□□□□ 0.77
SPIDR-220ENST00000522900 YWHAQP27348 245 aa19.84■□□□□ 0.77
SPIDR-220ENST00000522900 CXCL12P48061 93 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms