RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 FGF13Q92913 245 aa7.1□□□□□ -1.27
VPS13B-211ENST00000522802 MAP4K1Q92918 833 aa7.1□□□□□ -1.27
VPS13B-211ENST00000522802 MAP7D2Q96T17 732 aa7.1□□□□□ -1.27
VPS13B-211ENST00000522802 DSCC1Q9BVC3 393 aa7.1□□□□□ -1.27
VPS13B-211ENST00000522802 TRIM55Q9BYV6 548 aa7.1□□□□□ -1.27
VPS13B-211ENST00000522802 NT5C3AQ9H0P0 336 aa7.1□□□□□ -1.27
VPS13B-211ENST00000522802 LY9Q9HBG7 655 aa7.1□□□□□ -1.27
VPS13B-211ENST00000522802 DACT1Q9NYF0 836 aa7.1□□□□□ -1.27
VPS13B-211ENST00000522802 CDH7Q9ULB5 785 aa7.1□□□□□ -1.27
VPS13B-211ENST00000522802 RAB23Q9ULC3 237 aa7.1□□□□□ -1.27
VPS13B-211ENST00000522802 PIN4Q9Y237 131 aaKnown RBP7.1□□□□□ -1.27
VPS13B-211ENST00000522802 PRG3Q9Y2Y8 225 aaPredicted RBP7.1□□□□□ -1.27
VPS13B-211ENST00000522802 MSRB2Q9Y3D2 182 aa7.1□□□□□ -1.27
VPS13B-211ENST00000522802 F5P12259 2224 aa7.1□□□□□ -1.27
VPS13B-211ENST00000522802 CELSR3Q9NYQ7 3312 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 PDCD11Q14690 1871 aaKnown RBP7.09□□□□□ -1.27
VPS13B-211ENST00000522802 MEIS1O00470 390 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 NRP1O14786 923 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 LRP3O75074 770 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 POMCP01189 267 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 RNASE1P07998 156 aaKnown RBP7.09□□□□□ -1.27
VPS13B-211ENST00000522802 RPL17P18621 184 aaKnown RBP7.09□□□□□ -1.27
VPS13B-211ENST00000522802 RXRAP19793 462 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 HOXC13P31276 330 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 IRAK1P51617 712 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 PCBP3P57721 371 aaKnown RBP7.09□□□□□ -1.27
VPS13B-211ENST00000522802 ANTXR2P58335 489 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 TEKQ02763 1124 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 SF3A2Q15428 464 aaKnown RBP7.09□□□□□ -1.27
VPS13B-211ENST00000522802 UGCGQ16739 394 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 CEP55Q53EZ4 464 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 ANKRD45Q5TZF3 282 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 IL31Q6EBC2 164 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 TWF2Q6IBS0 349 aaKnown RBP7.09□□□□□ -1.27
VPS13B-211ENST00000522802 MIS18BP1Q6P0N0 1132 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 HEATR3Q7Z4Q2 680 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.09□□□□□ -1.27
VPS13B-211ENST00000522802 SRBD1Q8N5C6 995 aaKnown RBP7.09□□□□□ -1.27
VPS13B-211ENST00000522802 ITFG1Q8TB96 612 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 UBXN4Q92575 508 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 FAM126AQ9BYI3 521 aaPredicted RBP7.09□□□□□ -1.27
VPS13B-211ENST00000522802 PRDM7Q9NQW5 492 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 HEBP1Q9NRV9 189 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 DIAPH3Q9NSV4 1193 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 ZDHHC7Q9NXF8 308 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 SIRPGQ9P1W8 387 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 APEX2Q9UBZ4 518 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 RCAN3Q9UKA8 241 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 TCFL5Q9UL49 500 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 SPAG17Q6Q759 2223 aa7.09□□□□□ -1.27
VPS13B-211ENST00000522802 VWA8A3KMH1 1905 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 IGLV3-22A0A075B6J6 115 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 TMEM150BA6NC51 233 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 SRRM3A6NNA2 597 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-211ENST00000522802 FAM86B1E9PN63 330 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 SUSD5O60279 629 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 FAM86B2P0C5J1 330 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 NAT2P11245 290 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 VAV1P15498 845 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 SATB1Q01826 763 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 PRKCEQ02156 737 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 SIM2Q14190 667 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-211ENST00000522802 AASDHQ4L235 1098 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-211ENST00000522802 LCE1DQ5T752 114 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 RSPO2Q6UXX9 243 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-211ENST00000522802 CBLL1Q75N03 491 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 MTSS1LQ765P7 747 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 CATIPQ7Z7H3 387 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 TICAM2Q86XR7 235 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 RAB11FIP4Q86YS3 637 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 CELF5Q8N6W0 485 aaKnown RBP7.08□□□□□ -1.28
VPS13B-211ENST00000522802 CTCFLQ8NI51 663 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-211ENST00000522802 URGCPQ8TCY9 931 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 ING5Q8WYH8 240 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 RSPH1Q8WYR4 309 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 DDX1Q92499 740 aaKnown RBP7.08□□□□□ -1.28
VPS13B-211ENST00000522802 ALPK1Q96QP1 1244 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 PHF20Q9BVI0 1012 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 KRTAP4-7Q9BYR0 210 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 ANO3Q9BYT9 981 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 FOXP3Q9BZS1 431 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 NOL6Q9H6R4 1146 aaKnown RBP7.08□□□□□ -1.28
VPS13B-211ENST00000522802 RXFP1Q9HBX9 757 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 GABBR1Q9UBS5 961 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 NDRG2Q9UN36 371 aaKnown RBP7.08□□□□□ -1.28
VPS13B-211ENST00000522802 FAN1Q9Y2M0 1017 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 SF3B6Q9Y3B4 125 aaKnown RBP7.08□□□□□ -1.28
VPS13B-211ENST00000522802 SDK1Q7Z5N4 2213 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 EML5Q05BV3 1969 aa7.08□□□□□ -1.28
VPS13B-211ENST00000522802 A0A087WZ62 844 aa7.07□□□□□ -1.28
VPS13B-211ENST00000522802 TMEM82A0PJX8 343 aa7.07□□□□□ -1.28
VPS13B-211ENST00000522802 ERICH2A1L162 156 aa7.07□□□□□ -1.28
VPS13B-211ENST00000522802 H0Y8X5 98 aa7.07□□□□□ -1.28
VPS13B-211ENST00000522802 IPO5O00410 1097 aaKnown RBP7.07□□□□□ -1.28
VPS13B-211ENST00000522802 CCL16O15467 120 aa7.07□□□□□ -1.28
VPS13B-211ENST00000522802 MAGEB2O15479 319 aa7.07□□□□□ -1.28
VPS13B-211ENST00000522802 ZNF205O95201 554 aa7.07□□□□□ -1.28
VPS13B-211ENST00000522802 TOP3BO95985 862 aaKnown RBP7.07□□□□□ -1.28
VPS13B-211ENST00000522802 SYPP08247 313 aa7.07□□□□□ -1.28
VPS13B-211ENST00000522802 CYP21A2P08686 494 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms