RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 TTC39CQ8N584 583 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 TMEM105Q8N8V8 129 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 MAB21L3Q8N8X9 362 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 C12orf29Q8N999 325 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 SLC2A14Q8TDB8 520 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 DNASE1L2Q92874 299 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 SMARCD1Q96GM5 515 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 LRRC3BQ96PB8 259 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 MED15Q96RN5 788 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 KCNK16Q96T55 309 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 DNAI2Q9GZS0 605 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 TBC1D17Q9HA65 648 aa17.4■□□□□ 0.38
PABPC1-221ENST00000522720 CACNA1HO95180 2353 aa17.39■□□□□ 0.38
PABPC1-221ENST00000522720 STK25O00506 426 aa17.39■□□□□ 0.37
PABPC1-221ENST00000522720 ZNF263O14978 683 aa17.39■□□□□ 0.37
PABPC1-221ENST00000522720 P4HA2O15460 535 aa17.39■□□□□ 0.37
PABPC1-221ENST00000522720 AP1G2O75843 785 aa17.39■□□□□ 0.37
PABPC1-221ENST00000522720 CCDC130P13994 396 aa17.39■□□□□ 0.37
PABPC1-221ENST00000522720 AVPR1AP37288 418 aa17.39■□□□□ 0.37
PABPC1-221ENST00000522720 NUBP1P53384 320 aa17.39■□□□□ 0.37
PABPC1-221ENST00000522720 PRKCQQ04759 706 aa17.39■□□□□ 0.37
PABPC1-221ENST00000522720 YAF2Q8IY57 180 aa17.39■□□□□ 0.37
PABPC1-221ENST00000522720 NUP93Q8N1F7 819 aa17.39■□□□□ 0.37
PABPC1-221ENST00000522720 CELF5Q8N6W0 485 aaKnown RBP17.39■□□□□ 0.37
PABPC1-221ENST00000522720 CYFIP2Q96F07 1278 aa17.39■□□□□ 0.37
PABPC1-221ENST00000522720 HNRNPABQ99729 332 aaKnown RBP17.39■□□□□ 0.37
PABPC1-221ENST00000522720 PRRX2Q99811 253 aa17.39■□□□□ 0.37
PABPC1-221ENST00000522720 DMAP1Q9NPF5 467 aaPredicted RBP17.39■□□□□ 0.37
PABPC1-221ENST00000522720 CISHQ9NSE2 258 aa17.39■□□□□ 0.37
PABPC1-221ENST00000522720 TDP1Q9NUW8 608 aa17.39■□□□□ 0.37
PABPC1-221ENST00000522720 WDFY4Q6ZS81 3184 aa17.38■□□□□ 0.37
PABPC1-221ENST00000522720 GOLGA6L22H0YM25 854 aa17.38■□□□□ 0.37
PABPC1-221ENST00000522720 CHADO15335 359 aa17.38■□□□□ 0.37
PABPC1-221ENST00000522720 PI15O43692 258 aa17.38■□□□□ 0.37
PABPC1-221ENST00000522720 CCDC192P0DO97 292 aa17.38■□□□□ 0.37
PABPC1-221ENST00000522720 RFX1P22670 979 aa17.38■□□□□ 0.37
PABPC1-221ENST00000522720 PPP3CCP48454 512 aa17.38■□□□□ 0.37
PABPC1-221ENST00000522720 GPT2Q8TD30 523 aa17.38■□□□□ 0.37
PABPC1-221ENST00000522720 BPIFB1Q8TDL5 484 aa17.38■□□□□ 0.37
PABPC1-221ENST00000522720 USP13Q92995 863 aaPredicted RBP17.38■□□□□ 0.37
PABPC1-221ENST00000522720 SMOQ99835 787 aa17.38■□□□□ 0.37
PABPC1-221ENST00000522720 ARID3AQ99856 593 aa17.38■□□□□ 0.37
PABPC1-221ENST00000522720 DDX23Q9BUQ8 820 aaKnown RBP17.38■□□□□ 0.37
PABPC1-221ENST00000522720 SMG9Q9H0W8 520 aaKnown RBP17.38■□□□□ 0.37
PABPC1-221ENST00000522720 CSNK1G1Q9HCP0 422 aa17.38■□□□□ 0.37
PABPC1-221ENST00000522720 KRT82Q9NSB4 513 aa17.38■□□□□ 0.37
PABPC1-221ENST00000522720 FAM49BQ9NUQ9 324 aa17.38■□□□□ 0.37
PABPC1-221ENST00000522720 IL37Q9NZH6 218 aa17.38■□□□□ 0.37
PABPC1-221ENST00000522720 TRPM5Q9NZQ8 1165 aa17.38■□□□□ 0.37
PABPC1-221ENST00000522720 GCNT4Q9P109 453 aa17.38■□□□□ 0.37
PABPC1-221ENST00000522720 TRAV19A0A0A6YYK7 116 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 ZNF840PA6NDX5 716 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 ARNTLO00327 626 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 TNFRSF10BO14763 440 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 BEST1O76090 585 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 RTN3O95197 1032 aaPredicted RBP17.37■□□□□ 0.37
PABPC1-221ENST00000522720 PFKLP17858 780 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 YWHAQP27348 245 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 CETN1Q12798 172 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 KCNH2Q12809 1159 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 TAF10Q12962 218 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 CUL2Q13617 745 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 ZNF268Q14587 947 aaPredicted RBP17.37■□□□□ 0.37
PABPC1-221ENST00000522720 ARHGAP29Q52LW3 1261 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 ZNF394Q53GI3 561 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 ZMIZ2Q8NF64 920 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 SLC22A12Q96S37 553 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 CYP2S1Q96SQ9 504 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 KIF9Q9HAQ2 790 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 HEBP1Q9NRV9 189 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 CCL26Q9Y258 94 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.37■□□□□ 0.37
PABPC1-221ENST00000522720 TICRRQ7Z2Z1 1910 aa17.37■□□□□ 0.37
PABPC1-221ENST00000522720 KANSL1LA0AUZ9 987 aa17.36■□□□□ 0.37
PABPC1-221ENST00000522720 USP17L7P0C7H9 530 aa17.36■□□□□ 0.37
PABPC1-221ENST00000522720 FAM200BP0CF97 657 aa17.36■□□□□ 0.37
PABPC1-221ENST00000522720 GLULP15104 373 aa17.36■□□□□ 0.37
PABPC1-221ENST00000522720 HDCP19113 662 aa17.36■□□□□ 0.37
PABPC1-221ENST00000522720 TBXAS1P24557 533 aaPredicted RBP17.36■□□□□ 0.37
PABPC1-221ENST00000522720 RAD23BP54727 409 aa17.36■□□□□ 0.37
PABPC1-221ENST00000522720 MAP3K7CLP57077 242 aa17.36■□□□□ 0.37
PABPC1-221ENST00000522720 LRMPQ12912 555 aa17.36■□□□□ 0.37
PABPC1-221ENST00000522720 DPCR1Q3MIW9 517 aa17.36■□□□□ 0.37
PABPC1-221ENST00000522720 TPRG1Q6ZUI0 275 aa17.36■□□□□ 0.37
PABPC1-221ENST00000522720 ARL14EPQ8N8R7 260 aaPredicted RBP17.36■□□□□ 0.37
PABPC1-221ENST00000522720 SLC4A11Q8NBS3 891 aa17.36■□□□□ 0.37
PABPC1-221ENST00000522720 SCAMP5Q8TAC9 235 aa17.36■□□□□ 0.37
PABPC1-221ENST00000522720 LMO3Q8TAP4 145 aa17.36■□□□□ 0.37
PABPC1-221ENST00000522720 TMEM176AQ96HP8 235 aa17.36■□□□□ 0.37
PABPC1-221ENST00000522720 HEXIM2Q96MH2 286 aaKnown RBP17.36■□□□□ 0.37
PABPC1-221ENST00000522720 SLITRK1Q96PX8 696 aa17.36■□□□□ 0.37
PABPC1-221ENST00000522720 TRPC7Q9HCX4 862 aa17.36■□□□□ 0.37
PABPC1-221ENST00000522720 THG1LQ9NWX6 298 aaKnown RBP17.36■□□□□ 0.37
PABPC1-221ENST00000522720 COMMD8Q9NX08 183 aa17.36■□□□□ 0.37
PABPC1-221ENST00000522720 SIT1Q9Y3P8 196 aa17.36■□□□□ 0.37
PABPC1-221ENST00000522720 C2orf78A6NCI8 922 aa17.35■□□□□ 0.37
PABPC1-221ENST00000522720 SHISA7A6NL88 538 aa17.35■□□□□ 0.37
PABPC1-221ENST00000522720 AFPP02771 609 aaKnown RBP17.35■□□□□ 0.37
PABPC1-221ENST00000522720 CKMP06732 381 aa17.35■□□□□ 0.37
PABPC1-221ENST00000522720 ERCC5P28715 1186 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms