RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 MAP3K10Q02779 954 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 RETSATQ6NUM9 610 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 MS4A14Q96JA4 679 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 CNPY3Q9BT09 278 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 RRN3Q9NYV6 651 aa16.87■□□□□ 0.29
PCDHA3-201ENST00000522353 VIL1P09327 827 aaKnown RBP16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 ITGALP20701 1170 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 RHOAP61586 193 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 LRRC74AQ0VAA2 488 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 INPP5AQ14642 412 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 PTPAQ15257 358 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 RARS2Q5T160 578 aaKnown RBP16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 PCYOX1LQ8NBM8 494 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 BRD8Q9H0E9 1235 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 SFMBT1Q9UHJ3 866 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 PPP1R37O75864 691 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 GZMAP12544 262 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 DDR1Q08345 913 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 PHKG1Q16816 387 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 MDH1BQ5I0G3 518 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 GJB7Q6PEY0 223 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 KBTBD4Q9NVX7 518 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 TRPV2Q9Y5S1 764 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 MORC2Q9Y6X9 1032 aaPredicted RBP16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 ACADMP11310 421 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 CKBP12277 381 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 PON1P27169 355 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 HDAC4P56524 1084 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 MAP3K7CLP57077 242 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 POU4F1Q01851 419 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 NT5DC4Q86YG4 428 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 EPC1Q9H2F5 836 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 ALG13Q9NP73 1137 aaKnown RBP16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 DDX43Q9NXZ2 648 aaKnown RBP16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 APOBEC3HQ6NTF7 200 aaKnown RBP16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 RIBC1Q8N443 379 aaPredicted RBP16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 TC2NQ8N9U0 490 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 CATSPER1Q8NEC5 780 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 NAT9Q9BTE0 207 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 RANBP17Q9H2T7 1088 aaKnown RBP16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 CISHQ9NSE2 258 aa16.86■□□□□ 0.29
PCDHA3-201ENST00000522353 ZNF185O15231 689 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 POMCP01189 267 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 GYPCP04921 128 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 CXCL8P10145 99 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 GRIN1Q05586 938 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 HIC1Q14526 733 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 PTGISQ16647 500 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 FAM172AQ8WUF8 416 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 DACH2Q96NX9 599 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 MRIQ9BWK5 157 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 SNTG2Q9NY99 539 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 WWOXQ9NZC7 414 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 PLAGL2Q9UPG8 496 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 CYP11B1P15538 503 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 CDH2P19022 906 aaPredicted RBP16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 FNTAP49354 379 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 TP53BP2Q13625 1128 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 ICA1LQ8NDH6 482 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 SPIRE2Q8WWL2 714 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 MRPL1Q9BYD6 325 aaKnown RBP16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 IRX2Q9BZI1 471 aaPredicted RBP16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 SCUBE2Q9NQ36 999 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 MZF1P28698 734 aaPredicted RBP16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 MYL6P60660 151 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 NOGQ13253 232 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 TTC39BQ5VTQ0 682 aaPredicted RBP16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 ZPBP2Q6X784 338 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 ADGRA1Q86SQ6 560 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 ZNF507Q8TCN5 953 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 ABHD8Q96I13 439 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 ROPN1BQ9BZX4 212 aaPredicted RBP16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 ROPN1Q9HAT0 212 aaPredicted RBP16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 TMEM51Q9NW97 253 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 GPRC5DQ9NZD1 345 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 SLC39A10Q9ULF5 831 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 VPS26AO75436 327 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 TGM2P21980 687 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 DEFB115Q30KQ5 88 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 STX19Q8N4C7 294 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 ERP44Q9BS26 406 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 ARHGAP26Q9UNA1 814 aa16.85■□□□□ 0.29
PCDHA3-201ENST00000522353 PTPRAP18433 802 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 MDH1P40925 334 aaKnown RBP16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 TKTL1P51854 596 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 ORC1Q13415 861 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 SLC30A10Q6XR72 485 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 SLC13A5Q86YT5 568 aaPredicted RBP16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 KCNQ5Q9NR82 932 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 TMEM161AQ9NX61 479 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 UXTQ9UBK9 157 aaPredicted RBP16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 TCP11X1B4DZS4 312 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 ACKR2O00590 384 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 TUFMP49411 452 aaKnown RBP16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 FAM171A1Q5VUB5 890 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 ARL8AQ96BM9 186 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 CCDC90BQ9GZT6 254 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 COL5A2P05997 1499 aaPredicted RBP16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 FAM47DPA6NHR8 397 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms