RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 PHF13Q86YI8 300 aaPredicted RBP14.14□□□□□ -0.15
CLK4-210ENST00000522136 SCN4BQ8IWT1 228 aa14.14□□□□□ -0.15
CLK4-210ENST00000522136 REXO1L1PQ8IX06 675 aa14.14□□□□□ -0.15
CLK4-210ENST00000522136 STKLD1Q8NE28 680 aa14.14□□□□□ -0.15
CLK4-210ENST00000522136 GDPD5Q8WTR4 605 aa14.14□□□□□ -0.15
CLK4-210ENST00000522136 ARHGEF26Q96DR7 871 aa14.14□□□□□ -0.15
CLK4-210ENST00000522136 PPP1R13BQ96KQ4 1090 aa14.14□□□□□ -0.15
CLK4-210ENST00000522136 ADAM22Q9P0K1 906 aa14.14□□□□□ -0.15
CLK4-210ENST00000522136 COLQQ9Y215 455 aaPredicted RBP14.14□□□□□ -0.15
CLK4-210ENST00000522136 C2orf71A6NGG8 1288 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 F8VP50 259 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 XPO1O14980 1071 aaKnown RBP14.13□□□□□ -0.15
CLK4-210ENST00000522136 SEC24AO95486 1093 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 SPATA31D3P0C874 917 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 SETSIPP0DME0 302 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 GRIK1P39086 918 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 SMAD3P84022 425 aaKnown RBP14.13□□□□□ -0.15
CLK4-210ENST00000522136 RAB33AQ14088 237 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 DDR2Q16832 855 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 CFAP221Q4G0U5 840 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 C10orf76Q5T2E6 689 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 SPATA31D4Q6ZUB0 917 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 GPRIN1Q7Z2K8 1008 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 GPR65Q8IYL9 337 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 CCAR2Q8N163 923 aaKnown RBP14.13□□□□□ -0.15
CLK4-210ENST00000522136 MRPL43Q8N983 215 aaKnown RBP14.13□□□□□ -0.15
CLK4-210ENST00000522136 KLHL5Q96PQ7 755 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 CSNK1G1Q9HCP0 422 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 LZTFL1Q9NQ48 299 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.13□□□□□ -0.15
CLK4-210ENST00000522136 FNIP2Q9P278 1114 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 MYO1AQ9UBC5 1043 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 ATG2AQ2TAZ0 1938 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 ATP8B3O60423 1300 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 ANKRD62A6NC57 917 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 HHLA1C9JL84 531 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 E5RJQ4 531 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 FSCN2O14926 492 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 ABLIM3O94929 683 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 RRM1P23921 792 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 ARHGAP25P42331 645 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 PLA2G4AP47712 749 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 SMC1AQ14683 1233 aaKnown RBP14.13□□□□□ -0.15
CLK4-210ENST00000522136 ZNF461Q8TAF7 563 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 GPR152Q8TDT2 470 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 ZNF653Q96CK0 615 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 FUBP3Q96I24 572 aaKnown RBP eCLIP14.13□□□□□ -0.15
CLK4-210ENST00000522136 SLC4A5Q9BY07 1137 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 DMAP1Q9NPF5 467 aaPredicted RBP14.13□□□□□ -0.15
CLK4-210ENST00000522136 SALL4Q9UJQ4 1053 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 SSX2IPQ9Y2D8 614 aa14.13□□□□□ -0.15
CLK4-210ENST00000522136 PLXNA3P51805 1871 aa14.12□□□□□ -0.15
CLK4-210ENST00000522136 GJB6O95452 261 aa14.12□□□□□ -0.15
CLK4-210ENST00000522136 LCP1P13796 627 aa14.12□□□□□ -0.15
CLK4-210ENST00000522136 NDUFV1P49821 464 aa14.12□□□□□ -0.15
CLK4-210ENST00000522136 SLC8A3P57103 927 aa14.12□□□□□ -0.15
CLK4-210ENST00000522136 C1QBPQ07021 282 aaKnown RBP14.12□□□□□ -0.15
CLK4-210ENST00000522136 MGAT5BQ3V5L5 792 aa14.12□□□□□ -0.15
CLK4-210ENST00000522136 ZSCAN30Q86W11 494 aa14.12□□□□□ -0.15
CLK4-210ENST00000522136 SPPL2BQ8TCT7 592 aa14.12□□□□□ -0.15
CLK4-210ENST00000522136 CTNNBL1Q8WYA6 563 aaPredicted RBP14.12□□□□□ -0.15
CLK4-210ENST00000522136 NDRG1Q92597 394 aaKnown RBP14.12□□□□□ -0.15
CLK4-210ENST00000522136 C18orf8Q96DM3 657 aa14.12□□□□□ -0.15
CLK4-210ENST00000522136 SEPT5Q99719 369 aaPredicted RBP14.12□□□□□ -0.15
CLK4-210ENST00000522136 MIS12Q9H081 205 aa14.12□□□□□ -0.15
CLK4-210ENST00000522136 SYNCQ9H7C4 482 aa14.12□□□□□ -0.15
CLK4-210ENST00000522136 LUC7LQ9NQ29 371 aaKnown RBP14.12□□□□□ -0.15
CLK4-210ENST00000522136 CNOT8Q9UFF9 292 aaKnown RBP14.12□□□□□ -0.15
CLK4-210ENST00000522136 AFF4Q9UHB7 1163 aaKnown RBP14.12□□□□□ -0.15
CLK4-210ENST00000522136 IRAK3Q9Y616 596 aa14.12□□□□□ -0.15
CLK4-210ENST00000522136 TRIOBPQ9H2D6 2365 aa14.12□□□□□ -0.15
CLK4-210ENST00000522136 ZSCAN12O43309 604 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 TMEM253P0C7T8 217 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 HAPLN1P10915 354 aaPredicted RBP14.11□□□□□ -0.15
CLK4-210ENST00000522136 ATF2P15336 505 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 KLRC2P26717 231 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 GPC5P78333 572 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 SMARCB1Q12824 385 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 TMEM110Q86TL2 294 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 SCUBE3Q8IX30 993 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 CLEC4CQ8WTT0 213 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 STK32AQ8WU08 396 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 NOX5Q96PH1 765 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 ABCB6Q9NP58 842 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 NGRNQ9NPE2 291 aaKnown RBP14.11□□□□□ -0.15
CLK4-210ENST00000522136 INTUQ9ULD6 942 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 GUCA1BQ9UMX6 200 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 PAXBP1Q9Y5B6 917 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 GOLGA8SH3BPF8 625 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 PJA2O43164 708 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 TGM5O43548 720 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 CALB1P05937 261 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 MAGEA11P43364 429 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 GABRB2P47870 512 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 CREMQ03060 361 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 ADIGQ0VDE8 80 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 KIF5AQ12840 1032 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 TPGS2Q68CL5 300 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 VSTM1Q6UX27 236 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 XYLT1Q86Y38 959 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms