RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 E2F6O75461 281 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 SPAG6O75602 509 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 GHRP10912 638 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 TMEM119Q4V9L6 283 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 HP1BP3Q5SSJ5 553 aaPredicted RBP16.82■□□□□ 0.28
USP42-207ENST00000521713 TAS1R2Q8TE23 839 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 MTBPQ96DY7 904 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 PAWRQ96IZ0 340 aaKnown RBP16.82■□□□□ 0.28
USP42-207ENST00000521713 AKAP3O75969 853 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 LGALS2P05162 132 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 CKMP06732 381 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 CXCL8P10145 99 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 RALBP11234 206 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 TAL1P17542 331 aaPredicted RBP16.82■□□□□ 0.28
USP42-207ENST00000521713 KLK7P49862 253 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 EPHB3P54753 998 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 TMEM259Q4ZIN3 620 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 FASTKD1Q53R41 847 aaKnown RBP16.82■□□□□ 0.28
USP42-207ENST00000521713 DLGAP2Q9P1A6 1054 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 HIST1H2AGP0C0S8 130 aaPredicted RBP16.82■□□□□ 0.28
USP42-207ENST00000521713 HIST1H2ADP20671 130 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 AARSP49588 968 aaKnown RBP eCLIP16.82■□□□□ 0.28
USP42-207ENST00000521713 CTCFP49711 727 aaPredicted RBP16.82■□□□□ 0.28
USP42-207ENST00000521713 TWF1Q12792 350 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 TBCCQ15814 346 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 TMEM176AQ96HP8 235 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 HIST1H2AHQ96KK5 128 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 RPRD1AQ96P16 312 aaPredicted RBP16.82■□□□□ 0.28
USP42-207ENST00000521713 HIST1H2AJQ99878 128 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 H2AFJQ9BTM1 129 aa16.82■□□□□ 0.28
USP42-207ENST00000521713 NDUFS3O75489 264 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 MYO1DO94832 1006 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 CYP11B1P15538 503 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 UBA1P22314 1058 aaKnown RBP16.81■□□□□ 0.28
USP42-207ENST00000521713 MYL6P60660 151 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 SFSWAPQ12872 951 aaKnown RBP16.81■□□□□ 0.28
USP42-207ENST00000521713 MAP2K5Q13163 448 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 FOPNLQ96NB1 174 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 IRX2Q9BZI1 471 aaPredicted RBP16.81■□□□□ 0.28
USP42-207ENST00000521713 CARD9Q9H257 536 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 NSMCE4AQ9NXX6 385 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 ZC3H7BQ9UGR2 993 aaKnown RBP16.81■□□□□ 0.28
USP42-207ENST00000521713 FZD1Q9UP38 647 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 PTPN11Q06124 597 aaPredicted RBP16.81■□□□□ 0.28
USP42-207ENST00000521713 FLOT2Q14254 428 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 NAPEPLDQ6IQ20 393 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 KDELC2Q7Z4H8 507 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 DDI1Q8WTU0 396 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 ERP27Q96DN0 273 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 CISHQ9NSE2 258 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 SNTG2Q9NY99 539 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 ADA2Q9NZK5 511 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 ZNF229Q9UJW7 825 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 BLOC1S6Q9UL45 172 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 NRCAMQ92823 1304 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 F5H5T6 163 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 KLHL2O95198 593 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 CCDC159P0C7I6 412 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 CD44P16070 742 aaKnown RBP16.81■□□□□ 0.28
USP42-207ENST00000521713 DDX5P17844 614 aaKnown RBP16.81■□□□□ 0.28
USP42-207ENST00000521713 MAP3K7CLP57077 242 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 MAP3K10Q02779 954 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 CELF3Q5SZQ8 465 aaKnown RBP16.81■□□□□ 0.28
USP42-207ENST00000521713 RBM15Q96T37 977 aaKnown RBP eCLIP16.81■□□□□ 0.281e-6■■■■□ 21.5
USP42-207ENST00000521713 DDX28Q9NUL7 540 aaKnown RBP16.81■□□□□ 0.28
USP42-207ENST00000521713 CHCHD3Q9NX63 227 aaKnown RBP16.81■□□□□ 0.28
USP42-207ENST00000521713 GFAPP14136 432 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 MAP4P27816 1152 aaKnown RBP16.81■□□□□ 0.28
USP42-207ENST00000521713 STIP1P31948 543 aaKnown RBP16.81■□□□□ 0.28
USP42-207ENST00000521713 SERPINB9P50453 376 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 BTNL9Q6UXG8 535 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 TBC1D19Q8N5T2 526 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 KLRG1Q96E93 195 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 PNMA5Q96PV4 448 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 FRMD8P1Q9BZ68 369 aaPredicted RBP16.81■□□□□ 0.28
USP42-207ENST00000521713 L1RE1Q9UN81 338 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 MRC1P22897 1456 aa16.81■□□□□ 0.28
USP42-207ENST00000521713 ATMINO43313 823 aaPredicted RBP16.8■□□□□ 0.28
USP42-207ENST00000521713 AKT1P31749 480 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 ITIH5Q86UX2 942 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 MYCBPAPQ8TBZ2 947 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 KDM4CQ9H3R0 1056 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.8■□□□□ 0.28
USP42-207ENST00000521713 INTS13Q9NVM9 706 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 TBKBP1A7MCY6 615 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 IGF2BP3O00425 579 aaKnown RBP eCLIP16.8■□□□□ 0.28
USP42-207ENST00000521713 PSTPIP1O43586 416 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 AMHP03971 560 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 MBL2P11226 248 aaPredicted RBP16.8■□□□□ 0.28
USP42-207ENST00000521713 KPNA1P52294 538 aaPredicted RBP16.8■□□□□ 0.28
USP42-207ENST00000521713 INPP5AQ14642 412 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 OVOS1Q6IE37 1185 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 AIPL1Q9NZN9 384 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 AFF4Q9UHB7 1163 aaKnown RBP16.8■□□□□ 0.28
USP42-207ENST00000521713 PLA2G6O60733 806 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 ANXA9O76027 345 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 SNUPNO95149 360 aaKnown RBP16.8■□□□□ 0.28
USP42-207ENST00000521713 ETFBP38117 255 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 BTG3Q14201 252 aaPredicted RBP16.8■□□□□ 0.28
USP42-207ENST00000521713 TATDN1Q6P1N9 297 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms