RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 PTH1RQ03431 593 aa6.9□□□□□ -1.3
PABPC1-216ENST00000520868 FPGSQ05932 587 aa6.9□□□□□ -1.3
PABPC1-216ENST00000520868 ZBTB41Q5SVQ8 909 aa6.9□□□□□ -1.3
PABPC1-216ENST00000520868 IL17DQ8TAD2 202 aa6.9□□□□□ -1.3
PABPC1-216ENST00000520868 PPM1EQ8WY54 764 aa6.9□□□□□ -1.3
PABPC1-216ENST00000520868 USP7Q93009 1102 aa6.9□□□□□ -1.3
PABPC1-216ENST00000520868 ARL8AQ96BM9 186 aa6.9□□□□□ -1.3
PABPC1-216ENST00000520868 KIF1BPQ96EK5 621 aa6.9□□□□□ -1.3
PABPC1-216ENST00000520868 NUP88Q99567 741 aaPredicted RBP6.9□□□□□ -1.3
PABPC1-216ENST00000520868 SOX7Q9BT81 388 aa6.9□□□□□ -1.3
PABPC1-216ENST00000520868 EMC7Q9NPA0 242 aa6.9□□□□□ -1.3
PABPC1-216ENST00000520868 STARD7Q9NQZ5 370 aa6.9□□□□□ -1.3
PABPC1-216ENST00000520868 ATP8A2Q9NTI2 1148 aa6.9□□□□□ -1.3
PABPC1-216ENST00000520868 NRBP1Q9UHY1 535 aa6.9□□□□□ -1.3
PABPC1-216ENST00000520868 ING1Q9UK53 422 aaPredicted RBP6.9□□□□□ -1.3
PABPC1-216ENST00000520868 ADAMTS5Q9UNA0 930 aa6.9□□□□□ -1.3
PABPC1-216ENST00000520868 CNPY2Q9Y2B0 182 aa6.9□□□□□ -1.3
PABPC1-216ENST00000520868 NUMBLQ9Y6R0 609 aa6.9□□□□□ -1.3
PABPC1-216ENST00000520868 SLC4A4Q9Y6R1 1079 aa6.9□□□□□ -1.3
PABPC1-216ENST00000520868 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.89□□□□□ -1.31
PABPC1-216ENST00000520868 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.89□□□□□ -1.31
PABPC1-216ENST00000520868 HMMRO75330 724 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 IPO13O94829 963 aaKnown RBP6.89□□□□□ -1.31
PABPC1-216ENST00000520868 SNAI1O95863 264 aaPredicted RBP6.89□□□□□ -1.31
PABPC1-216ENST00000520868 GAAP10253 952 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 ACLYP53396 1101 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 NRG3P56975 720 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 ELAVL1Q15717 326 aaKnown RBP6.89□□□□□ -1.31
PABPC1-216ENST00000520868 ATP13A4Q4VNC1 1196 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 FKBP15Q5T1M5 1219 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 CTR9Q6PD62 1173 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 ZNF662Q6ZS27 426 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 CXorf67Q86X51 503 aaPredicted RBP6.89□□□□□ -1.31
PABPC1-216ENST00000520868 RPAP2Q8IXW5 612 aaPredicted RBP6.89□□□□□ -1.31
PABPC1-216ENST00000520868 GSPT2Q8IYD1 628 aaKnown RBP6.89□□□□□ -1.31
PABPC1-216ENST00000520868 CPXCR1Q8N123 301 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 REPS2Q8NFH8 660 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 GAB3Q8WWW8 586 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 SLC5A5Q92911 643 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 PLEKHG4BQ96PX9 1271 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 SLF1Q9BQI6 1058 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.89□□□□□ -1.31
PABPC1-216ENST00000520868 PUS7LQ9H0K6 701 aaKnown RBP6.89□□□□□ -1.31
PABPC1-216ENST00000520868 ZNF703Q9H7S9 590 aaPredicted RBP6.89□□□□□ -1.31
PABPC1-216ENST00000520868 PARPBPQ9NWS1 579 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 NCDNQ9UBB6 729 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 ZHX1Q9UKY1 873 aaPredicted RBP6.89□□□□□ -1.31
PABPC1-216ENST00000520868 RIPK3Q9Y572 518 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 FRMPD3Q5JV73 1810 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 RLFQ13129 1914 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 SMCHD1A6NHR9 2005 aa6.89□□□□□ -1.31
PABPC1-216ENST00000520868 TTC28Q96AY4 2481 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 SYNRGQ9UMZ2 1314 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 MYADML2A6NDP7 307 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 GRXCR1A8MXD5 290 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 NPIPB8E9PQR5 432 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 F5H6K3 240 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 ZEB2O60315 1214 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 KDM1AO60341 852 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 MFAP3LO75121 409 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 ZBED4O75132 1171 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 TIMP1P01033 207 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 ATP5JP18859 108 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 HSD3B2P26439 372 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 COPB2P35606 906 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 KLRC3Q07444 240 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 KLF10Q13118 480 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 SPIDRQ14159 915 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 UBE3CQ15386 1083 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 BROXQ5VW32 411 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 SNRNP48Q6IEG0 339 aaKnown RBP6.88□□□□□ -1.31
PABPC1-216ENST00000520868 CCDC129Q6ZRS4 1044 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 RASSF3Q86WH2 238 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 TMPRSS6Q8IU80 811 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 USP38Q8NB14 1042 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 KLHDC9Q8NEP7 349 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 NUP133Q8WUM0 1156 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 SORCS2Q96PQ0 1159 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 TEX13BQ9BXU2 312 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 IFT22Q9H7X7 185 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 RAVER2Q9HCJ3 691 aaKnown RBP6.88□□□□□ -1.31
PABPC1-216ENST00000520868 CLIP2Q9UDT6 1046 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 USP18Q9UMW8 372 aa6.88□□□□□ -1.31
PABPC1-216ENST00000520868 NOC2LQ9Y3T9 749 aaKnown RBP6.88□□□□□ -1.31
PABPC1-216ENST00000520868 PRSS38A1L453 326 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 ADCY6O43306 1168 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 DUSP11O75319 330 aaKnown RBP6.87□□□□□ -1.31
PABPC1-216ENST00000520868 ALDH1A2O94788 518 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 SEC24DO94855 1032 aaPredicted RBP6.87□□□□□ -1.31
PABPC1-216ENST00000520868 NDUFB10O96000 172 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 ASGR1P07306 291 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 C1SP09871 688 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 BPIP17213 487 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 MAN2A2P49641 1150 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 CDK7P50613 346 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 ACVR2BQ13705 512 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 LSM12Q3MHD2 195 aaKnown RBP6.87□□□□□ -1.31
PABPC1-216ENST00000520868 CCSAPQ6IQ19 270 aaPredicted RBP6.87□□□□□ -1.31
PABPC1-216ENST00000520868 ZSCAN25Q6NSZ9 544 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 ANKRD33Q7Z3H0 272 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms