RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 IL1BP01584 269 aa12.37□□□□□ -0.43
PCDHGB6-201ENST00000520790 S100BP04271 92 aaPredicted RBP12.37□□□□□ -0.43
PCDHGB6-201ENST00000520790 TKTP29401 623 aaKnown RBP12.37□□□□□ -0.43
PCDHGB6-201ENST00000520790 ARMC6Q6NXE6 501 aa12.37□□□□□ -0.43
PCDHGB6-201ENST00000520790 CCDC110Q8TBZ0 833 aa12.37□□□□□ -0.43
PCDHGB6-201ENST00000520790 MAP10Q9P2G4 905 aa12.37□□□□□ -0.43
PCDHGB6-201ENST00000520790 NCDNQ9UBB6 729 aa12.37□□□□□ -0.43
PCDHGB6-201ENST00000520790 CDH9Q9ULB4 789 aa12.37□□□□□ -0.43
PCDHGB6-201ENST00000520790 ADGRA2Q96PE1 1338 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 F9P00740 461 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 CCR1P32246 355 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 DGKEP52429 567 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 SLC12A3P55017 1021 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 SEC13P55735 322 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 TAF10Q12962 218 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 BBS9Q3SYG4 887 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 TTC31Q49AM3 519 aaPredicted RBP12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 DSG4Q86SJ6 1040 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 C10orf67Q8IYJ2 551 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 STK39Q9UEW8 545 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 VAV3Q9UKW4 847 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 IGLV3-22A0A075B6J6 115 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 FUT2Q10981 343 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 UAP1L1Q3KQV9 507 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 HS6ST3Q8IZP7 471 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 CCDC33Q8N5R6 958 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 EMC1Q8N766 993 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 B3GALNT2Q8NCR0 500 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 ACRBPQ8NEB7 543 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 ZMYM2Q9UBW7 1377 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 FOXN3O00409 490 aaPredicted RBP12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 BAIAP3O94812 1187 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 FBXO21O94952 628 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 SETSIPP0DME0 302 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 MAPTP10636 758 aaKnown RBP12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 GPD1P21695 349 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 DEFB103AP81534 67 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 MICALCLQ6ZW33 695 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 ADCK2Q7Z695 626 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 NUP93Q8N1F7 819 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 OR5B17Q8NGF7 314 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 MYLIPQ8WY64 445 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 CDKL2Q92772 493 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 SHDQ96IW2 340 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 SAMD11Q96NU1 681 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 ABCG4Q9H172 646 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 CDHR5Q9HBB8 845 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 ATP13A1Q9HD20 1204 aa12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 DNAJC17Q9NVM6 304 aaKnown RBP12.36□□□□□ -0.43
PCDHGB6-201ENST00000520790 NEDD8-MDP1E9PL57 170 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 ATMINO43313 823 aaPredicted RBP12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 TJP3O95049 919 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 RARGP13631 454 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 SLC11A1P49279 550 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 CCHCR1Q8TD31 782 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 PDZD7Q9H5P4 517 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 KNTC1P50748 2209 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 STAMBPO95630 424 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 ADH1CP00326 375 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 CFIP05156 583 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 OR1E1P30953 314 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 BMPR1AP36894 532 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 CPA6Q8N4T0 437 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 PDZD8Q8NEN9 1154 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 BSNDQ8WZ55 320 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 RBM41Q96IZ5 413 aaKnown RBP12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 TRMT61BQ9BVS5 477 aaKnown RBP12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 DNMT3LQ9UJW3 386 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 HCN4Q9Y3Q4 1203 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 C2CD2Q9Y426 696 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 APC2O95996 2303 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 GVINP1Q7Z2Y8 2422 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 TTC26A0AVF1 554 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 ATP9BO43861 1147 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 APODP05090 189 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 MX2P20592 715 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 FBXL19Q6PCT2 694 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 EXT2Q93063 718 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 FAF2Q96CS3 445 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 GDAP1L1Q96MZ0 367 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 SELENOSQ9BQE4 189 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 STN1Q9H668 368 aaKnown RBP12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 OLA1Q9NTK5 396 aaKnown RBP12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 GGCXP38435 758 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 MTHFRP42898 656 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 CASP5P51878 434 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 YWHAZP63104 245 aaKnown RBP12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 PSMD6Q15008 389 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 IQCB1Q15051 598 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 SYCP2LQ5T4T6 812 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 FBXL16Q8N461 479 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 SLC25A41Q8N5S1 370 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 HLA-CQ95604 372 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 VANGL2Q9ULK5 521 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 SLC30A1Q9Y6M5 507 aa12.35□□□□□ -0.43
PCDHGB6-201ENST00000520790 TMEM119Q4V9L6 283 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 ARL14EPQ8N8R7 260 aaPredicted RBP12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 CFAP61Q8NHU2 1237 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 GRIN3AQ8TCU5 1115 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms