RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 BCO2Q9BYV7 579 aa9.95□□□□□ -0.82
HDAC3-215ENST00000519474 ZNF518BQ9C0D4 1074 aa9.95□□□□□ -0.82
HDAC3-215ENST00000519474 RNF38Q9H0F5 515 aa9.95□□□□□ -0.82
HDAC3-215ENST00000519474 C8orf33Q9H7E9 229 aaPredicted RBP9.95□□□□□ -0.82
HDAC3-215ENST00000519474 APOBEC3GQ9HC16 384 aaKnown RBP9.95□□□□□ -0.82
HDAC3-215ENST00000519474 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.95□□□□□ -0.826e-10■■■■■ 98.2
HDAC3-215ENST00000519474 RMND1Q9NWS8 449 aa9.95□□□□□ -0.82
HDAC3-215ENST00000519474 IL37Q9NZH6 218 aa9.95□□□□□ -0.82
HDAC3-215ENST00000519474 CHORDC1Q9UHD1 332 aaPredicted RBP9.95□□□□□ -0.82
HDAC3-215ENST00000519474 NDRG2Q9UN36 371 aaKnown RBP9.95□□□□□ -0.82
HDAC3-215ENST00000519474 MRPS17Q9Y2R5 130 aaKnown RBP9.95□□□□□ -0.82
HDAC3-215ENST00000519474 PIAS3Q9Y6X2 628 aa9.95□□□□□ -0.82
HDAC3-215ENST00000519474 CACNA1IQ9P0X4 2223 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 DENND4CQ5VZ89 1909 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 C2orf78A6NCI8 922 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 TNFRSF10BO14763 440 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 TRIM66O15016 1216 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 CETN3O15182 167 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 BEST1O76090 585 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 SMC2O95347 1197 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 KRT13P13646 458 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 CD44P16070 742 aaKnown RBP9.94□□□□□ -0.82
HDAC3-215ENST00000519474 HDCP19113 662 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 BMP6P22004 513 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 GTF2H1P32780 548 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 AVPR1AP37288 418 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 KPNA1P52294 538 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-215ENST00000519474 NDST1P52848 882 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 NOP14P78316 857 aaKnown RBP9.94□□□□□ -0.82
HDAC3-215ENST00000519474 GAS6Q14393 721 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 ZNF268Q14587 947 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-215ENST00000519474 TXNDC11Q6PKC3 985 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 DENND5BQ6ZUT9 1274 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 ASCL5Q7RTU5 278 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 FRMD5Q7Z6J6 570 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 UNC93AQ86WB7 457 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 ZC3H3Q8IXZ2 948 aaKnown RBP9.94□□□□□ -0.82
HDAC3-215ENST00000519474 FUKQ8N0W3 1084 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 GPATCH11Q8N954 259 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 C12orf29Q8N999 325 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 WHAMMQ8TF30 809 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 TATDN2Q93075 761 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 SMARCE1Q969G3 411 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 LINC00597Q9H2U6 94 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 HPS4Q9NQG7 708 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 THG1LQ9NWX6 298 aaKnown RBP9.94□□□□□ -0.82
HDAC3-215ENST00000519474 MAN1B1Q9UKM7 699 aa9.94□□□□□ -0.82
HDAC3-215ENST00000519474 CIZ1Q9ULV3 898 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-215ENST00000519474 ZNF840PA6NDX5 716 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 PPP1R3GB7ZBB8 358 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 SPECC1L-ADORA2AF8WAN1 911 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 LAMTOR5O43504 91 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 USP17L7P0C7H9 530 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 P4HA1P13674 534 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 ANXA13P27216 316 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 MAGEA9P43362 315 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 ASPAP45381 313 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 FKBP3Q00688 224 aaKnown RBP9.93□□□□□ -0.82
HDAC3-215ENST00000519474 TAF10Q12962 218 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 MTAPQ13126 283 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 ORC1Q13415 861 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 RUNX3Q13761 415 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 KRT39Q6A163 491 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 TRIM68Q6AZZ1 485 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 SCARA5Q6ZMJ2 495 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 RALGPS2Q86X27 583 aaPredicted RBP9.93□□□□□ -0.82
HDAC3-215ENST00000519474 NUP93Q8N1F7 819 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 ZMIZ2Q8NF64 920 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 SCAMP5Q8TAC9 235 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 CHFRQ96EP1 664 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 DHTKD1Q96HY7 919 aaPredicted RBP9.93□□□□□ -0.82
HDAC3-215ENST00000519474 TNIP3Q96KP6 325 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 TWNKQ96RR1 684 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 SMOQ99835 787 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 ELOVL4Q9GZR5 314 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 MMRN2Q9H8L6 949 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 CYP3A43Q9HB55 503 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 FBRSL1Q9HCM7 1045 aaKnown RBP9.93□□□□□ -0.82
HDAC3-215ENST00000519474 TMEM8AQ9HCN3 771 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 TRPC7Q9HCX4 862 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 SPATA6Q9NWH7 488 aaPredicted RBP9.93□□□□□ -0.82
HDAC3-215ENST00000519474 TRPM5Q9NZQ8 1165 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 HMGXB4Q9UGU5 601 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 R4GN57 208 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 GREB1Q4ZG55 1949 aa9.93□□□□□ -0.82
HDAC3-215ENST00000519474 TRAV19A0A0A6YYK7 116 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 TRIM49BA6NDI0 452 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 GFRA3O60609 400 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 CCDC130P13994 396 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 ARSAP15289 507 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 TCF3P15923 654 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 PFKLP17858 780 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 YWHAQP27348 245 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 CTHP32929 405 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 PIK3CAP42336 1068 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 PPP3CCP48454 512 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 PGFP49763 221 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 GALK1P51570 392 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 CSTF1Q05048 431 aaKnown RBP9.92□□□□□ -0.82
HDAC3-215ENST00000519474 INCA1Q0VD86 236 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms