RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 COPAP53621 1224 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 CLNS1AP54105 237 aaKnown RBP6.65□□□□□ -1.34
SQLE-203ENST00000518931 NAP1L1P55209 391 aaKnown RBP6.65□□□□□ -1.34
SQLE-203ENST00000518931 RAB1AP62820 205 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 EXOSC9Q06265 439 aaKnown RBP6.65□□□□□ -1.34
SQLE-203ENST00000518931 TP53BP2Q13625 1128 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 GALEQ14376 348 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 PTPAQ15257 358 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 LLGL1Q15334 1064 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 LCE5AQ5TCM9 118 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 CYB5RLQ6IPT4 315 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 ARMC6Q6NXE6 501 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 TLDC1Q6P9B6 456 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 ZNF449Q6P9G9 518 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 NPNTQ6UXI9 565 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 ARHGEF19Q8IW93 802 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 Q8NA96 180 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 NEU4Q8WWR8 484 aaPredicted RBP6.65□□□□□ -1.34
SQLE-203ENST00000518931 LARP4BQ92615 738 aaKnown RBP6.65□□□□□ -1.34
SQLE-203ENST00000518931 CENPTQ96BT3 561 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 HVCN1Q96D96 273 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 VKORC1Q9BQB6 163 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 NAA15Q9BXJ9 866 aaKnown RBP6.65□□□□□ -1.34
SQLE-203ENST00000518931 SLC26A6Q9BXS9 759 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 RSAD1Q9HA92 442 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 KCNE5Q9UJ90 142 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 AGAP1Q9UPQ3 857 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 RRP9O43818 475 aaKnown RBP6.64□□□□□ -1.35
SQLE-203ENST00000518931 GFPT2O94808 682 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 SPDEFO95238 335 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 ATF7P17544 494 aaPredicted RBP6.64□□□□□ -1.35
SQLE-203ENST00000518931 ACVRL1P37023 503 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 TM4SF4P48230 202 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 HABP2Q14520 560 aaPredicted RBP6.64□□□□□ -1.35
SQLE-203ENST00000518931 PTPN14Q15678 1187 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 CCNG2Q16589 344 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 CYP2A13Q16696 494 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 NBPF8Q3BBV2 869 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 ANO6Q4KMQ2 910 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 CRB2Q5IJ48 1285 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 ITPRIPL1Q6GPH6 555 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 KLHL10Q6JEL2 608 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 TMCO3Q6UWJ1 677 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 CHST15Q7LFX5 561 aaPredicted RBP6.64□□□□□ -1.35
SQLE-203ENST00000518931 SRGAP1Q7Z6B7 1085 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 USP37Q86T82 979 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 COLGALT2Q8IYK4 626 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 PCSK9Q8NBP7 692 aaKnown RBP6.64□□□□□ -1.35
SQLE-203ENST00000518931 SGCZQ96LD1 299 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 CCDC138Q96M89 665 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 NT5C1BQ96P26 610 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 CRB3Q9BUF7 120 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 KRTAP4-9Q9BYQ8 210 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 WDR11Q9BZH6 1224 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 SCAND2PQ9GZW5 306 aaPredicted RBP6.64□□□□□ -1.35
SQLE-203ENST00000518931 LMAN2LQ9H0V9 348 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 GPR35Q9HC97 309 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 GALNT9Q9HCQ5 603 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 ARFGAP3Q9NP61 516 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.64□□□□□ -1.35
SQLE-203ENST00000518931 ANKEF1Q9NU02 776 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 GPR52Q9Y2T5 361 aa6.64□□□□□ -1.35
SQLE-203ENST00000518931 M0R3H8 397 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 ZFPL1O95159 310 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 DDX58O95786 925 aaKnown RBP6.63□□□□□ -1.35
SQLE-203ENST00000518931 GNAI2P04899 355 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 RHCEP18577 417 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 KCNJ5P48544 419 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 AGFG1P52594 562 aaKnown RBP6.63□□□□□ -1.35
SQLE-203ENST00000518931 SOX8P57073 446 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 RHDQ02161 417 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 PIGFQ07326 219 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 PARP10Q53GL7 1025 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 SLC30A10Q6XR72 485 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 ZNF627Q7L945 461 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 VRK3Q8IV63 474 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 SAMD14Q8IZD0 417 aaPredicted RBP6.63□□□□□ -1.35
SQLE-203ENST00000518931 CELF5Q8N6W0 485 aaKnown RBP6.63□□□□□ -1.35
SQLE-203ENST00000518931 SLC16A11Q8NCK7 471 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 KAT6AQ92794 2004 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 N4BP2L2Q92802 583 aaPredicted RBP6.63□□□□□ -1.35
SQLE-203ENST00000518931 SH3KBP1Q96B97 665 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 LRIG1Q96JA1 1093 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 TRIB1Q96RU8 372 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 SMOQ99835 787 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 B3GNT5Q9BYG0 378 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 ABCG4Q9H172 646 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 SERHL2Q9H4I8 314 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 CNNM1Q9NRU3 951 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 PDRG1Q9NUG6 133 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 TMEM74BQ9NUR3 256 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 DCAF16Q9NXF7 216 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 CTTNBP2NLQ9P2B4 639 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 TMEM98Q9Y2Y6 226 aa6.63□□□□□ -1.35
SQLE-203ENST00000518931 COL4A3Q01955 1670 aa6.62□□□□□ -1.35
SQLE-203ENST00000518931 SYNDIG1LA6NDD5 238 aa6.62□□□□□ -1.35
SQLE-203ENST00000518931 MYADML2A6NDP7 307 aa6.62□□□□□ -1.35
SQLE-203ENST00000518931 POLRMTO00411 1230 aaKnown RBP6.62□□□□□ -1.35
SQLE-203ENST00000518931 VPS4BO75351 444 aa6.62□□□□□ -1.35
SQLE-203ENST00000518931 TIPRLO75663 272 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms