RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 DENND3A2RUS2 1198 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 BLACEA4D250 179 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 TBKBP1A7MCY6 615 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 SP9P0CG40 484 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 IBSPP21815 317 aaPredicted RBP6.95□□□□□ -1.3
CCDC6-203ENST00000518638 FPR2P25090 351 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 MAGEA9P43362 315 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 ATXN1P54253 815 aaKnown RBP6.95□□□□□ -1.3
CCDC6-203ENST00000518638 SP2Q02086 613 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 LSAMPQ13449 338 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 ALX1Q15699 326 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 SLC24A5Q71RS6 500 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 C1orf210Q8IVY1 113 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 LRRC43Q8N309 656 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 NME8Q8N427 588 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 ZSWIM2Q8NEG5 633 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 DDX1Q92499 740 aaKnown RBP6.95□□□□□ -1.3
CCDC6-203ENST00000518638 TBC1D5Q92609 795 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 ESR2Q92731 530 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 STAMQ92783 540 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 GLG1Q92896 1179 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 KISS1RQ969F8 398 aaPredicted RBP6.95□□□□□ -1.3
CCDC6-203ENST00000518638 ZNF558Q96NG5 402 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 APOL5Q9BWW9 433 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 KAT14Q9H8E8 782 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 CNTD2Q9H8S5 307 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 SFXN1Q9H9B4 322 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 AGO3Q9H9G7 860 aaKnown RBP6.95□□□□□ -1.3
CCDC6-203ENST00000518638 ATP6V0A4Q9HBG4 840 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 STK39Q9UEW8 545 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 CNOT11Q9UKZ1 510 aaKnown RBP6.95□□□□□ -1.3
CCDC6-203ENST00000518638 MRPS23Q9Y3D9 190 aaKnown RBP6.95□□□□□ -1.3
CCDC6-203ENST00000518638 PCDHGA2Q9Y5H1 932 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 COL4A3BPQ9Y5P4 624 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 X6R8D5 127 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 ACACBO00763 2458 aa6.95□□□□□ -1.3
CCDC6-203ENST00000518638 NCOR2Q9Y618 2525 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 C22orf46C9J442 243 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 H7BY64 318 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 GCOM1H8Y6P7 765 aaPredicted RBP6.94□□□□□ -1.3
CCDC6-203ENST00000518638 PI15O43692 258 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 PARP1P09874 1014 aaKnown RBP6.94□□□□□ -1.3
CCDC6-203ENST00000518638 POLR2MP0CAP2 368 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 TCF7P36402 384 aaPredicted RBP6.94□□□□□ -1.3
CCDC6-203ENST00000518638 ANAPC15P60006 121 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 RARS2Q5T160 578 aaKnown RBP6.94□□□□□ -1.3
CCDC6-203ENST00000518638 UTP14CQ5TAP6 766 aaKnown RBP6.94□□□□□ -1.3
CCDC6-203ENST00000518638 MROH9Q5TGP6 573 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 KCNT2Q6UVM3 1135 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 CYP26C1Q6V0L0 522 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 C15orf39Q6ZRI6 1047 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 MFSD6Q6ZSS7 791 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 CEP68Q76N32 757 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 MAMDC2Q7Z304 686 aaPredicted RBP6.94□□□□□ -1.3
CCDC6-203ENST00000518638 TMC6Q7Z403 805 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 TICAM2Q86XR7 235 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 MRPL43Q8N983 215 aaKnown RBP6.94□□□□□ -1.3
CCDC6-203ENST00000518638 LINC01356Q8N9X3 169 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 SUMF1Q8NBK3 374 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 TRMT2BQ96GJ1 504 aaKnown RBP6.94□□□□□ -1.3
CCDC6-203ENST00000518638 TMEM169Q96HH4 297 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 UBA5Q9GZZ9 404 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 TMEM117Q9H0C3 514 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 SMOC2Q9H3U7 446 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 SMARCAD1Q9H4L7 1026 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 PCDH12Q9NPG4 1184 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 TYW1Q9NV66 732 aaKnown RBP6.94□□□□□ -1.3
CCDC6-203ENST00000518638 TMEM161AQ9NX61 479 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 SPG21Q9NZD8 308 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 DPP7Q9UHL4 492 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 NUDT5Q9UKK9 219 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 FBXO4Q9UKT5 387 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 SIT1Q9Y3P8 196 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 FRMPD4Q14CM0 1322 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 OTOGLQ3ZCN5 2332 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 CACNA1GO43497 2377 aa6.94□□□□□ -1.3
CCDC6-203ENST00000518638 CCDC163A0A0D9SF12 145 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 SMIM35A0A1B0GVV1 85 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 HIDE1A8MVS5 230 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 ZBTB5O15062 677 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 RPS6KA5O75582 802 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 NTRK1P04629 796 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 GOLGA8HP0CJ92 632 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 CA8P35219 290 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 GPR85P60893 370 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 RTP5Q14D33 572 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 RTN4RL1Q86UN2 441 aaPredicted RBP6.93□□□□□ -1.3
CCDC6-203ENST00000518638 FAM129CQ86XR2 697 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 DCP2Q8IU60 420 aaKnown RBP6.93□□□□□ -1.3
CCDC6-203ENST00000518638 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.93□□□□□ -1.3
CCDC6-203ENST00000518638 ATRIPQ8WXE1 791 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 SEPT1Q8WYJ6 367 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 RIN2Q8WYP3 895 aaPredicted RBP6.93□□□□□ -1.3
CCDC6-203ENST00000518638 PTPRN2Q92932 1015 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 TSPAN17Q96FV3 270 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 PEX11GQ96HA9 241 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 SEC62Q99442 399 aaKnown RBP6.93□□□□□ -1.3
CCDC6-203ENST00000518638 MRPL9Q9BYD2 267 aaKnown RBP6.93□□□□□ -1.3
CCDC6-203ENST00000518638 CELF4Q9BZC1 486 aaKnown RBP6.93□□□□□ -1.3
CCDC6-203ENST00000518638 FAM49AQ9H0Q0 323 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms