RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 FOLR3P41439 243 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 MAPK10P53779 464 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 BCAT1P54687 386 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 TNFAIP2Q03169 654 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 CHAF1AQ13111 956 aaPredicted RBP5.36□□□□□ -1.55
SQLE-202ENST00000518604 CACHD1Q5VU97 1274 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 CRIP3Q6Q6R5 217 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 MORC4Q8TE76 937 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 LPIN2Q92539 896 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 ZDHHC12Q96GR4 267 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 Q96MF0 132 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 AIFM2Q9BRQ8 373 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 TTLL2Q9BWV7 592 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 STK33Q9BYT3 514 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 MMRN2Q9H8L6 949 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 ZBTB26Q9HCK0 441 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 NECTIN3Q9NQS3 549 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 SERTAD3Q9UJW9 196 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 PCDHGB2Q9Y5G2 931 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 MAST3O60307 1309 aa5.36□□□□□ -1.55
SQLE-202ENST00000518604 IFRD1O00458 451 aaPredicted RBP5.35□□□□□ -1.55
SQLE-202ENST00000518604 MATN3O15232 486 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 YY2O15391 372 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 SLC16A3O15427 465 aaKnown RBP5.35□□□□□ -1.55
SQLE-202ENST00000518604 MPPED1O15442 326 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 CD3EAPO15446 510 aaKnown RBP5.35□□□□□ -1.55
SQLE-202ENST00000518604 PEX1O43933 1283 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 ZNF202O95125 648 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 ONECUT2O95948 504 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 ADH4P08319 380 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 HNRNPMP52272 730 aaKnown RBP eCLIP5.35□□□□□ -1.55
SQLE-202ENST00000518604 STK3Q13188 491 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 C10orf62Q5T681 223 aaPredicted RBP5.35□□□□□ -1.55
SQLE-202ENST00000518604 RRAGBQ5VZM2 374 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 KIAA0895LQ68EN5 471 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 PGBD2Q6P3X8 592 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 ULK2Q8IYT8 1036 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 ABRAQ8N0Z2 381 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 OSCP1Q8WVF1 389 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 ATRIPQ8WXE1 791 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 LINC00476Q8WZB0 136 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 SLC9A6Q92581 669 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 LRRC46Q96FV0 321 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 FAM227BQ96M60 508 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 ARPC5LQ9BPX5 153 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 CYP4F11Q9HBI6 524 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 KLC4Q9NSK0 619 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 GJB4Q9NTQ9 266 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 SH2B3Q9UQQ2 575 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 TBC1D30Q9Y2I9 924 aa5.35□□□□□ -1.55
SQLE-202ENST00000518604 GOLGA6L3A6NEY3 463 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 NPIPB8E9PQR5 432 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 F5H423 210 aaPredicted RBP5.34□□□□□ -1.55
SQLE-202ENST00000518604 PPM1DO15297 605 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 SRGAP2O75044 1071 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 TNFRSF1AP19438 455 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 GABRB3P28472 473 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 EPHA3P29320 983 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 IL6STP40189 918 aaPredicted RBP5.34□□□□□ -1.55
SQLE-202ENST00000518604 ATXN1P54253 815 aaKnown RBP5.34□□□□□ -1.55
SQLE-202ENST00000518604 ABHD18Q0P651 414 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 STARD3Q14849 445 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 ZNF618Q5T7W0 954 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 ARL6IP4Q66PJ3 421 aaKnown RBP5.34□□□□□ -1.55
SQLE-202ENST00000518604 MRNIPQ6NTE8 343 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 FBXO38Q6PIJ6 1188 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 Q6ZNX1 250 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 KIAA0408Q6ZU52 694 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 KCTD20Q7Z5Y7 419 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 RAB11FIP4Q86YS3 637 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 TOR1AIP2Q8NFQ8 470 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 DNAJB14Q8TBM8 379 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 MYCBPAPQ8TBZ2 947 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 ATG4AQ8WYN0 398 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 FKBP10Q96AY3 582 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 RSPRY1Q96DX4 576 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 PRRX2Q99811 253 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 GBA2Q9HCG7 927 aaPredicted RBP5.34□□□□□ -1.55
SQLE-202ENST00000518604 SYBUQ9NX95 663 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 RGL1Q9NZL6 768 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 EHD3Q9NZN3 535 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 TMOD4Q9NZQ9 345 aa5.34□□□□□ -1.55
SQLE-202ENST00000518604 ARID4BQ4LE39 1312 aaPredicted RBP5.33□□□□□ -1.56
SQLE-202ENST00000518604 ADGRA2Q96PE1 1338 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 A0A087WV62 115 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 A0A087WZ62 844 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 WDR27A2RRH5 827 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 CCDC151A5D8V7 595 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 TMEM191CA6NGB0 347 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 FFAR2O15552 330 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 COQ9O75208 318 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 NXPH3O95157 252 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 ESRRBO95718 433 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 SLC5A2P31639 672 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 UQCRC1P31930 480 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 BUD31P41223 144 aaPredicted RBP5.33□□□□□ -1.56
SQLE-202ENST00000518604 KRTAP10-2P60368 255 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 TIAL1Q01085 375 aaKnown RBP eCLIP5.33□□□□□ -1.56
SQLE-202ENST00000518604 GRM1Q13255 1194 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 MPP3Q13368 585 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms