RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 SEC24BO95487 1268 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 KLF8O95600 359 aaPredicted RBP12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 ITGB3P05106 788 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 ITPKAP23677 461 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 PNPLA4P41247 253 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 SLC6A11P48066 632 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 USP46P62068 366 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 MRPS21P82921 87 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 POU5F1Q01860 360 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 MCM6Q14566 821 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 MAP7D1Q3KQU3 841 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 EMC10Q5UCC4 262 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 PEAR1Q5VY43 1037 aaPredicted RBP12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 SLFN12LQ6IEE8 588 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 SLC23A3Q6PIS1 610 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 FILIP1Q7Z7B0 1213 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 C12orf40Q86WS4 652 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 SPATA2LQ8IUW3 424 aaPredicted RBP12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 SCN4BQ8IWT1 228 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 FSIP1Q8NA03 581 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 WHAMMQ8TF30 809 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 ST6GALNAC4Q9H4F1 302 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 PILRBQ9UKJ0 227 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 AGAP1Q9UPQ3 857 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 ADAMTS20P59510 1910 aa12.17□□□□□ -0.46
CTNNA1-205ENST00000517904 CEP192Q8TEP8 1941 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 FAM221BA6H8Z2 402 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 UPK3BL1B0FP48 263 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 UPK3BL2E5RIL1 263 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 GABRDO14764 452 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 MAP3K13O43283 966 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 HUS1O60921 280 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 ADAM23O75077 832 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 ATP2C2O75185 946 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 TBCAO75347 108 aaKnown RBP12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 ALDH1A2O94788 518 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 KAT7O95251 611 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 IL18RAPO95256 599 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 KRT18P05783 430 aaKnown RBP12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 PLCG1P19174 1290 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 TIE1P35590 1138 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 KIR2DL1P43626 348 aaPredicted RBP12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 TFAMQ00059 246 aaKnown RBP12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 MYL7Q01449 175 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 DHCR24Q15392 516 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 LYSMD4Q5XG99 296 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 ARL6IP4Q66PJ3 421 aaKnown RBP12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 NT5DC4Q86YG4 428 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 ADGRG2Q8IZP9 1017 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 TMEM86AQ8N2M4 240 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 CHCHD4Q8N4Q1 142 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 HMGB4Q8WW32 186 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 POMGNT1Q8WZA1 660 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 RAD54LQ92698 747 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 FUBP3Q96I24 572 aaKnown RBP eCLIP12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 SPACA7Q96KW9 195 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 ZSCAN31Q96LW9 406 aaPredicted RBP12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 RNF38Q9H0F5 515 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 GDAP2Q9NXN4 497 aa12.16□□□□□ -0.46
CTNNA1-205ENST00000517904 HELZ2Q9BYK8 2649 aaKnown RBP12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 KALRNO60229 2985 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 PPP1R37O75864 691 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 CFIP05156 583 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 ABCD1P33897 745 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 MAGEA11P43364 429 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 PSMC1P62191 440 aaKnown RBP12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 KCNA1Q09470 495 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 SOWAHAQ2M3V2 549 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 SPDYCQ5MJ68 293 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 MCTP1Q6DN14 999 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 FAM171BQ6P995 826 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 ZNF720Q7Z2F6 126 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 PROSER1Q86XN7 944 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 BRSK2Q8IWQ3 736 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 ADGRF2Q8IZF7 708 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 LRRC52Q8N7C0 313 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 OR2I1PQ8NGU4 316 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 SPATA18Q8TC71 538 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 SAAL1Q96ER3 474 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 CALML4Q96GE6 196 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 AK8Q96MA6 479 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 PNKPQ96T60 521 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 FAM213AQ9BRX8 229 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 GTPBP2Q9BX10 602 aaKnown RBP12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 STRA6Q9BX79 667 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 CAPN10Q9HC96 672 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 POLMQ9NP87 494 aaPredicted RBP12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 BCCIPQ9P287 314 aaKnown RBP eCLIP12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 SNX9Q9Y5X1 595 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 APC2O95996 2303 aa12.15□□□□□ -0.46
CTNNA1-205ENST00000517904 FLNBO75369 2602 aaKnown RBP12.14□□□□□ -0.47
CTNNA1-205ENST00000517904 ACACAQ13085 2346 aa12.14□□□□□ -0.47
CTNNA1-205ENST00000517904 A0A0A0MRY4 1105 aa12.14□□□□□ -0.47
CTNNA1-205ENST00000517904 TCRBV21S2A2A0A5A6 115 aa12.14□□□□□ -0.47
CTNNA1-205ENST00000517904 MYMKA6NI61 221 aa12.14□□□□□ -0.47
CTNNA1-205ENST00000517904 H0Y626 953 aa12.14□□□□□ -0.47
CTNNA1-205ENST00000517904 TULP1O00294 542 aaPredicted RBP12.14□□□□□ -0.47
CTNNA1-205ENST00000517904 SLC26A4O43511 780 aa12.14□□□□□ -0.47
CTNNA1-205ENST00000517904 TRIM16O95361 564 aa12.14□□□□□ -0.47
CTNNA1-205ENST00000517904 OLFM2O95897 454 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms