RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 NDE1Q9NXR1 346 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 HEY2Q9UBP5 337 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 FAM8A1Q9UBU6 413 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 PDE4DIPQ5VU43 2346 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 ZFXP17010 805 aaPredicted RBP11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 RECQLP46063 649 aaPredicted RBP11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 APOBEC3HQ6NTF7 200 aaKnown RBP11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 FEZF2Q8TBJ5 459 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 SYTL5Q8TDW5 730 aaPredicted RBP11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 RMDN1Q96DB5 314 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 NSL1Q96IY1 281 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 GCNAQ96QF7 691 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 EPAS1Q99814 870 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 DCLRE1BQ9H816 532 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 GAKO14976 1311 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 E2F8A0AVK6 867 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 PTPN4P29074 926 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 GEMIN4P57678 1058 aaKnown RBP11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 KDSRQ06136 332 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 PKN2Q16513 984 aaKnown RBP11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 CCNG2Q16589 344 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 ITPRIPL1Q6GPH6 555 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 ST13P4Q8IZP2 240 aaPredicted RBP11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 CENPKQ9BS16 269 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 RANBP17Q9H2T7 1088 aaKnown RBP11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 LMCD1Q9NZU5 365 aa11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 XPO7Q9UIA9 1087 aaKnown RBP11.29□□□□□ -0.6
PCDHGA1-202ENST00000517417 PSTPIP1O43586 416 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 CALCAP01258 141 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 CUL2Q13617 745 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 MYBPC2Q14324 1141 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 KRT80Q6KB66 452 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 CLMNQ96JQ2 1002 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 ANKRD27Q96NW4 1050 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 SERPINI1Q99574 410 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 TMEM109Q9BVC6 243 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 KIAA1683Q9H0B3 1180 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 PLEKHA5Q9HAU0 1116 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 CYP39A1Q9NYL5 469 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 MYH13Q9UKX3 1938 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 UPP2O95045 317 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 KYAT1Q16773 422 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 FAM71DQ8N9W8 422 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 TTC8Q8TAM2 541 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 GANCQ8TET4 914 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 PCDHB18PQ96TA0 734 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 HACD3Q9P035 362 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 SUN2Q9UH99 717 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 FZD1Q9UP38 647 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 GSTA4O15217 222 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 PROSCO94903 275 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 UBTFL6P0CB48 400 aaPredicted RBP11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 AP2B1P63010 937 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 ZNF268Q14587 947 aaPredicted RBP11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 FAXCQ5TGI0 409 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 FAM117BQ6P1L5 589 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 SV2AQ7L0J3 742 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 PRUNE1Q86TP1 453 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 PABPC5Q96DU9 382 aaKnown RBP11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 MAGEB5Q9BZ81 275 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 METTL5Q9NRN9 209 aaKnown RBP11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 PIK3CDO00329 1044 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 NPTXRO95502 500 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 CYP1A2P05177 515 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 KIZQ2M2Z5 673 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 WASHC2DQ5SRD0 308 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 RNF219Q5W0B1 726 aaPredicted RBP11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 ANGPTL8Q6UXH0 198 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 RASSF3Q86WH2 238 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 SPATA2LQ8IUW3 424 aaPredicted RBP11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 FBXO16Q8IX29 292 aaPredicted RBP11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 MCOLN2Q8IZK6 566 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 CCDC33Q8N5R6 958 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 PPCSQ9HAB8 311 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 C17orf75Q9HAS0 396 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 SLC8A2Q9UPR5 921 aa11.28□□□□□ -0.6
PCDHGA1-202ENST00000517417 PLCH1Q4KWH8 1693 aa11.27□□□□□ -0.6
PCDHGA1-202ENST00000517417 SNED1Q8TER0 1413 aa11.27□□□□□ -0.6
PCDHGA1-202ENST00000517417 NUP98P52948 1817 aa11.27□□□□□ -0.6
PCDHGA1-202ENST00000517417 OGTO15294 1046 aa11.27□□□□□ -0.6
PCDHGA1-202ENST00000517417 EEF1B2P24534 225 aaKnown RBP11.27□□□□□ -0.6
PCDHGA1-202ENST00000517417 MORF4L2Q15014 288 aa11.27□□□□□ -0.6
PCDHGA1-202ENST00000517417 TMEM259Q4ZIN3 620 aa11.27□□□□□ -0.6
PCDHGA1-202ENST00000517417 ACAD11Q709F0 780 aa11.27□□□□□ -0.6
PCDHGA1-202ENST00000517417 FRA10AC1Q70Z53 315 aa11.27□□□□□ -0.6
PCDHGA1-202ENST00000517417 AMIGO3Q86WK7 504 aa11.27□□□□□ -0.6
PCDHGA1-202ENST00000517417 RAET1EQ8TD07 263 aa11.27□□□□□ -0.6
PCDHGA1-202ENST00000517417 SLCO1B3Q9NPD5 702 aa11.27□□□□□ -0.6
PCDHGA1-202ENST00000517417 MTO1Q9Y2Z2 717 aaKnown RBP11.27□□□□□ -0.6
PCDHGA1-202ENST00000517417 MYH14Q7Z406 1995 aaKnown RBP11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 B2RBV5 119 aa11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 SNX2O60749 519 aa11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 FMO1Q01740 532 aa11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 DEUP1Q05D60 604 aa11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 LRRC23Q53EV4 343 aaPredicted RBP11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 VAV3Q9UKW4 847 aa11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 STARD13Q9Y3M8 1113 aa11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 NEMP1O14524 444 aa11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 MUTP22033 750 aa11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 PPARGP37231 505 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms