RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 RRP1BQ14684 758 aaKnown RBP3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 SPDYE7PQ495Y7 208 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 PDCD4Q53EL6 469 aaKnown RBP3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 RAP1GAP2Q684P5 730 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 TMEM108Q6UXF1 575 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 LCNL1Q6ZST4 164 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 DTX2Q86UW9 622 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 RAB11FIP4Q86YS3 637 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 SPARTQ8N0X7 666 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 ATG16L2Q8NAA4 619 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 THAP4Q8WY91 577 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 SNX19Q92543 992 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 PPP2R3CQ969Q6 453 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 MYEOVQ96EZ4 313 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 WWC2-AS2Q96NR7 200 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 WDR24Q96S15 920 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 TTYH3Q9C0H2 523 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 TWSG1Q9GZX9 223 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 CXorf36Q9H7Y0 433 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 PRDM8Q9NQV8 689 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 RASSF1Q9NS23 344 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 INTS13Q9NVM9 706 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 MRPS18AQ9NVS2 196 aaKnown RBP3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 EIF2B4Q9UI10 523 aaKnown RBP3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 SH2B3Q9UQQ2 575 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 LZTS1Q9Y250 596 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 HPSEQ9Y251 543 aa3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.86□□□□□ -1.79
RNU6-390P-201ENST00000516259 A0A0B4J269 797 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 TMEM200CA6NKL6 621 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 IPO5O00410 1097 aaKnown RBP3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 TOR1BO14657 336 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 PIP5K1BO14986 540 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 ZNF185O15231 689 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 NCAM2O15394 837 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 VPS4BO75351 444 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 VIPP01282 170 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 CSF1RP07333 972 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 ARP10275 920 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 CD6P30203 668 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 PRKAR1BP31321 381 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 PDE6CP51160 858 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 ADAM17P78536 824 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 BLOC1S1P78537 153 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 HSD11B2P80365 405 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 FPGSQ05932 587 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 TBX2Q13207 712 aaPredicted RBP3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 TUBB3Q13509 450 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 POSTNQ15063 836 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 PRKD1Q15139 912 aaPredicted RBP3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 MAPRE1Q15691 268 aaKnown RBP3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 BEAN1Q3B7T3 259 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 TEDDM1Q5T9Z0 273 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 INTS11Q5TA45 600 aaKnown RBP3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 RRAGBQ5VZM2 374 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 ABLIM2Q6H8Q1 611 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 JMJD6Q6NYC1 403 aaPredicted RBP3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 LVRNQ6Q4G3 990 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 USP49Q70CQ1 688 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 LIMS2Q7Z4I7 341 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 ZNF280BQ86YH2 543 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 RASGRP3Q8IV61 690 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 SLC44A2Q8IWA5 706 aaPredicted RBP3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 SLC15A3Q8IY34 581 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 ADGRG5Q8IZF4 528 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 IPO4Q8TEX9 1081 aaKnown RBP3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 WDR60Q8WVS4 1066 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 OVCA2Q8WZ82 227 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 UBXN10Q96LJ8 280 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 PPM1MQ96MI6 270 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 PRPF18Q99633 342 aaKnown RBP3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 PAAF1Q9BRP4 392 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 INO80BQ9C086 356 aaPredicted RBP3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 AMBRA1Q9C0C7 1298 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 SLC25A32Q9H2D1 315 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 PABPC3Q9H361 631 aaKnown RBP3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 ZCCHC4Q9H5U6 513 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 SAGE1Q9NXZ1 904 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 LRFN1Q9P244 771 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 KIF17Q9P2E2 1029 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 SLC13A4Q9UKG4 626 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 SSX2IPQ9Y2D8 614 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 TMEM98Q9Y2Y6 226 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 TCAF1Q9Y4C2 921 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 HS3ST4Q9Y661 456 aa3.85□□□□□ -1.79
RNU6-390P-201ENST00000516259 CCDC78A2IDD5 438 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 AQP12BA6NM10 295 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 EFCAB8A8MWE9 144 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 PCDH17O14917 1159 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 PRICKLE3O43900 615 aaPredicted RBP3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 ONECUT2O95948 504 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 ANXA6P08133 673 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 CD19P15391 556 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 UQCRC1P31930 480 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 GATMP50440 423 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 ALDH18A1P54886 795 aaKnown RBP3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 NXPH1P58417 271 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 AP2B1P63010 937 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 VAMP2P63027 116 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 TLE2Q04725 743 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms