RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 MSX2P35548 267 aaPredicted RBP2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 DHX8Q14562 1220 aaKnown RBP2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 ZRSR2Q15696 482 aaKnown RBP2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 CRB2Q5IJ48 1285 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 MICALCLQ6ZW33 695 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 ADGRG2Q8IZP9 1017 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 ZNF483Q8TF39 744 aaPredicted RBP2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 KAZALD1Q96I82 304 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 CPPED1Q9BRF8 314 aaPredicted RBP2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 MYH16Q9H6N6 1097 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 NPHP4O75161 1426 aaPredicted RBP2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 TCRBV7S2A1N4TA0A589 114 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 KRTAP9-7A8MTY7 169 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 A8MVJ9 347 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 H3BUI4 141 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 KIAA0355O15063 1070 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 CDC14BO60729 498 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 GNAI2P04899 355 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 ELANEP08246 267 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 ZNF20P17024 532 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 SYN1P17600 705 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 WT1P19544 449 aaPredicted RBP2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 CNR2P34972 360 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 CCT5P48643 541 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 ATXN1P54253 815 aaKnown RBP2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 SOX10P56693 466 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 BLMHQ13867 455 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 NFIXQ14938 502 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 ZACNQ401N2 412 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 ERICH6BQ5W0A0 696 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 ZNF529Q6P280 563 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 RASGRP2Q7LDG7 609 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 SRLQ86TD4 932 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 COL23A1Q86Y22 540 aaPredicted RBP2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 OR56A3Q8NH54 315 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 DVL3Q92997 716 aaPredicted RBP2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 SPSB4Q96A44 273 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 PGBD1Q96JS3 809 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 TNIP3Q96KP6 325 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 TIMP4Q99727 224 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 DPYSL5Q9BPU6 564 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 AGAP1Q9UPQ3 857 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 DLC1Q96QB1 1528 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 SETD5Q9C0A6 1442 aa2.04□□□□□ -2.08
AC025539.1-201ENST00000515343 ARID1BQ8NFD5 2236 aaPredicted RBP2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 FFAR2O15552 330 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 STC2O76061 302 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 PARP1P09874 1014 aaKnown RBP2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 IFIT2P09913 472 aaKnown RBP2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 HDCP19113 662 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 CST5P28325 142 aaPredicted RBP2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 RRADP55042 308 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 NOMO3P69849 1222 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 CCT2P78371 535 aaKnown RBP2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 IQCB1Q15051 598 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 NOMO2Q5JPE7 1267 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 KRT40Q6A162 431 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 MRNIPQ6NTE8 343 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 GDF7Q7Z4P5 450 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 EXOC8Q8IYI6 725 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 UHRF1Q96T88 793 aaPredicted RBP2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 SMOQ99835 787 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 AMBRA1Q9C0C7 1298 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 GSTO2Q9H4Y5 243 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 FNIP2Q9P278 1114 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 OGDHLQ9ULD0 1010 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 ATP11BQ9Y2G3 1177 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 TMEM98Q9Y2Y6 226 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 ZNF335Q9H4Z2 1342 aaPredicted RBP2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 CICQ96RK0 1608 aaPredicted RBP2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 PRDM15P57071 1507 aaPredicted RBP2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 PREX2Q70Z35 1606 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 H3BNC9 293 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 APOL1O14791 398 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 TBC1D4O60343 1298 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 PRSS23O95084 383 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 GRPP07492 148 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 PDIA3P30101 505 aaKnown RBP2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 PXNP49023 591 aaPredicted RBP2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 VAMP2P63027 116 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 BOP1Q14137 746 aaKnown RBP2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 ACOX1Q15067 660 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 ARL13BQ3SXY8 428 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 TEDDM1Q5T9Z0 273 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 LCE5AQ5TCM9 118 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 XRRA1Q6P2D8 792 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 WDR53Q7Z5U6 358 aaPredicted RBP2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 SKAP1Q86WV1 359 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 PPM1NQ8N819 430 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 OTUD7AQ8TE49 926 aaPredicted RBP2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 TFAP2CQ92754 450 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 ADAM2Q99965 735 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 ARPC5LQ9BPX5 153 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 TMLHEQ9NVH6 421 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 CHD2O14647 1828 aaKnown RBP2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 DCCP43146 1447 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 PZPP20742 1482 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 ADAMTS7Q9UKP4 1686 aa2.03□□□□□ -2.08
AC025539.1-201ENST00000515343 TAF4O00268 1085 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms