RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 APOBEC3GQ9HC16 384 aaKnown RBP8.7□□□□□ -1.02
NEDD4-210ENST00000513957 DMAP1Q9NPF5 467 aaPredicted RBP8.7□□□□□ -1.02
NEDD4-210ENST00000513957 OBP2AQ9NY56 170 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 MUTYHQ9UIF7 546 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 DUSP12Q9UNI6 340 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 NOVA2Q9UNW9 492 aaKnown RBP8.7□□□□□ -1.02
NEDD4-210ENST00000513957 SLC27A5Q9Y2P5 690 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 NCANO14594 1321 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 ECI2O75521 394 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 RTN3O95197 1032 aaPredicted RBP8.69□□□□□ -1.02
NEDD4-210ENST00000513957 TPM2P07951 284 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 HMGA1P17096 107 aaKnown RBP8.69□□□□□ -1.02
NEDD4-210ENST00000513957 BDNFP23560 247 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 CYP2F1P24903 491 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 GABRR2P28476 465 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 GRIK1P39086 918 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 RAP1GAPP47736 663 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 CDH8P55286 799 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 ZXDAP98168 799 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 PFKPQ01813 784 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 STILQ15468 1287 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 SLC5A9Q2M3M2 681 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 SKOR2Q2VWA4 1001 aaPredicted RBP8.69□□□□□ -1.02
NEDD4-210ENST00000513957 MDH1BQ5I0G3 518 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 IER5LQ5T953 404 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 DENND5BQ6ZUT9 1274 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 FAM35AQ86V20 835 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 KIAA1958Q8N8K9 716 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 PDZD8Q8NEN9 1154 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 ANKRD20A12PQ8NF67 263 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 ITFG1Q8TB96 612 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 DEPDC1BQ8WUY9 529 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 SEMA4DQ92854 862 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 ELSPBP1Q96BH3 223 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 ASB16Q96NS5 453 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 MED15Q96RN5 788 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 HNRNPABQ99729 332 aaKnown RBP8.69□□□□□ -1.02
NEDD4-210ENST00000513957 LPIN3Q9BQK8 851 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 BPIFA3Q9BQP9 254 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 KIF9Q9HAQ2 790 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 CSNK1G1Q9HCP0 422 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 CISHQ9NSE2 258 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 GCNT4Q9P109 453 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 KIAA1257Q9ULG3 409 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 DAAM1Q9Y4D1 1078 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 NME7Q9Y5B8 376 aa8.69□□□□□ -1.02
NEDD4-210ENST00000513957 COL4A2P08572 1712 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 MIA3Q5JRA6 1907 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 PRR33A8MZF0 331 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 ATP2C2O75185 946 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 CAVIN2O95810 425 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 PAEPP09466 180 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 FAM200BP0CF97 657 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 SRFP11831 508 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 MYL4P12829 197 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 CEBPBP17676 345 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 SP100P23497 879 aaPredicted RBP8.68□□□□□ -1.02
NEDD4-210ENST00000513957 CCR2P41597 374 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 MTIF2P46199 727 aaKnown RBP8.68□□□□□ -1.02
NEDD4-210ENST00000513957 TUBP50607 506 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 SLC8A3P57103 927 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 NTHL1P78549 312 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 MYL5Q02045 173 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 MEA1Q16626 185 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 EXOC3L4Q17RC7 722 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 ARHGAP17Q68EM7 881 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 GBP6Q6ZN66 633 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 GAREM2Q75VX8 874 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 BMP8AQ7Z5Y6 402 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 ACOT1Q86TX2 421 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 IRF2BP1Q8IU81 584 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 SCN4BQ8IWT1 228 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 FUKQ8N0W3 1084 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 EHBP1Q8NDI1 1231 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 LMO3Q8TAP4 145 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 SHKBP1Q8TBC3 707 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 FEZF2Q8TBJ5 459 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 MRPS31Q92665 395 aaKnown RBP8.68□□□□□ -1.02
NEDD4-210ENST00000513957 SMARCD2Q92925 531 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 TMEM176AQ96HP8 235 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 SLITRK1Q96PX8 696 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 B3GNT5Q9BYG0 378 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 ATXN3LQ9H3M9 355 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 DPEP3Q9H4B8 488 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 FBXO44Q9H4M3 255 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 TASP1Q9H6P5 420 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 IL21Q9HBE4 155 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 ZFP14Q9HCL3 533 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 SLC2A4RGQ9NR83 387 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 KRT82Q9NSB4 513 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 TMEM63CQ9P1W3 806 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 ZMIZ1Q9ULJ6 1067 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 NFE2L3Q9Y4A8 694 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 NUMBLQ9Y6R0 609 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 KMT2EQ8IZD2 1858 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 TICRRQ7Z2Z1 1910 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 TECTAO75443 2155 aa8.68□□□□□ -1.02
NEDD4-210ENST00000513957 A0A1W2PRU2 124 aa8.67□□□□□ -1.02
NEDD4-210ENST00000513957 FAM92AA1XBS5 289 aa8.67□□□□□ -1.02
NEDD4-210ENST00000513957 SLC38A8A6NNN8 435 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms