RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 TTLL10Q6ZVT0 673 aa5.13□□□□□ -1.59
NIPBL-207ENST00000513819 C1orf210Q8IVY1 113 aa5.13□□□□□ -1.59
NIPBL-207ENST00000513819 SLC15A3Q8IY34 581 aa5.13□□□□□ -1.59
NIPBL-207ENST00000513819 CPXCR1Q8N123 301 aa5.13□□□□□ -1.59
NIPBL-207ENST00000513819 CPEB3Q8NE35 698 aaKnown RBP5.13□□□□□ -1.59
NIPBL-207ENST00000513819 IL17DQ8TAD2 202 aa5.13□□□□□ -1.59
NIPBL-207ENST00000513819 ZNF384Q8TF68 577 aa5.13□□□□□ -1.59
NIPBL-207ENST00000513819 LTV1Q96GA3 475 aaPredicted RBP5.13□□□□□ -1.59
NIPBL-207ENST00000513819 BOD1Q96IK1 185 aa5.13□□□□□ -1.59
NIPBL-207ENST00000513819 NELL2Q99435 816 aa5.13□□□□□ -1.59
NIPBL-207ENST00000513819 ADAM2Q99965 735 aa5.13□□□□□ -1.59
NIPBL-207ENST00000513819 SORBS1Q9BX66 1292 aaKnown RBP5.13□□□□□ -1.59
NIPBL-207ENST00000513819 MAGEH1Q9H213 219 aa5.13□□□□□ -1.59
NIPBL-207ENST00000513819 CHMP4BQ9H444 224 aaKnown RBP5.13□□□□□ -1.59
NIPBL-207ENST00000513819 UNKLQ9H9P5 680 aaKnown RBP5.13□□□□□ -1.59
NIPBL-207ENST00000513819 GALNT9Q9HCQ5 603 aa5.13□□□□□ -1.59
NIPBL-207ENST00000513819 NECTIN3Q9NQS3 549 aa5.13□□□□□ -1.59
NIPBL-207ENST00000513819 CEP72Q9P209 647 aa5.13□□□□□ -1.59
NIPBL-207ENST00000513819 SCAF8Q9UPN6 1271 aaKnown RBP5.13□□□□□ -1.59
NIPBL-207ENST00000513819 HPSEQ9Y251 543 aa5.13□□□□□ -1.59
NIPBL-207ENST00000513819 SSX2IPQ9Y2D8 614 aa5.13□□□□□ -1.59
NIPBL-207ENST00000513819 DGKBQ9Y6T7 804 aa5.13□□□□□ -1.59
NIPBL-207ENST00000513819 TRGV11A0A075B6L2 103 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 UNC119BA6NIH7 251 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 SYT5O00445 386 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 CD3EAPO15446 510 aaKnown RBP5.12□□□□□ -1.59
NIPBL-207ENST00000513819 ASNA1O43681 348 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 TRIAP1O43715 76 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 CDKL5O76039 1030 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 HLA-DOAP06340 250 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 HGFP14210 728 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 VEGFAP15692 232 aaPredicted RBP5.12□□□□□ -1.59
NIPBL-207ENST00000513819 MCCP23508 829 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 DDX6P26196 483 aaKnown RBP eCLIP5.12□□□□□ -1.59
NIPBL-207ENST00000513819 PPIFP30405 207 aaKnown RBP5.12□□□□□ -1.59
NIPBL-207ENST00000513819 SERPINF1P36955 418 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 SP2Q02086 613 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 PTK2BQ14289 1009 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 MAPKAPK3Q16644 382 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 USP39Q53GS9 565 aaKnown RBP5.12□□□□□ -1.59
NIPBL-207ENST00000513819 HSP90AB4PQ58FF6 505 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 FAXCQ5TGI0 409 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 SFRP4Q6FHJ7 346 aaPredicted RBP5.12□□□□□ -1.59
NIPBL-207ENST00000513819 ZNF354CQ86Y25 554 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 ZNF276Q8N554 614 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 TTC9BQ8N6N2 239 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 FAM71BQ8TC56 605 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 PRPF18Q99633 342 aaKnown RBP5.12□□□□□ -1.59
NIPBL-207ENST00000513819 AMBRA1Q9C0C7 1298 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 SLC25A32Q9H2D1 315 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 FAM83DQ9H4H8 585 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 TMEM74BQ9NUR3 256 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 AURKAIP1Q9NWT8 199 aaPredicted RBP5.12□□□□□ -1.59
NIPBL-207ENST00000513819 SMPD4Q9NXE4 827 aa5.12□□□□□ -1.59
NIPBL-207ENST00000513819 NPHP1O15259 732 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 PPM1DO15297 605 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 LPXNO60711 386 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 COQ9O75208 318 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 USP1O94782 785 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 SPDEFO95238 335 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 FGAP02671 866 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 PDHA1P08559 390 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 PPP3CBP16298 524 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 PAX3P23760 479 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 MST1P26927 711 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 NTSR1P30989 418 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 HNRNPMP52272 730 aaKnown RBP eCLIP5.11□□□□□ -1.59
NIPBL-207ENST00000513819 BIRC3Q13489 604 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 POSTNQ15063 836 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 SLC5A9Q2M3M2 681 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 PRR16Q569H4 304 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 SPDYAQ5MJ70 313 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 DEPDC1Q5TB30 811 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 ICE2Q659A1 982 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 ARL6IP4Q66PJ3 421 aaKnown RBP5.11□□□□□ -1.59
NIPBL-207ENST00000513819 SP5Q6BEB4 398 aaPredicted RBP5.11□□□□□ -1.59
NIPBL-207ENST00000513819 SMAP1Q8IYB5 467 aaPredicted RBP5.11□□□□□ -1.59
NIPBL-207ENST00000513819 COLGALT2Q8IYK4 626 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 FAM109AQ8N4B1 249 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 SLC30A5Q8TAD4 765 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 CXorf38Q8TB03 319 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 TBC1D20Q96BZ9 403 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 FAM136AQ96C01 138 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 ZBTB45Q96K62 511 aaPredicted RBP5.11□□□□□ -1.59
NIPBL-207ENST00000513819 OSBPL9Q96SU4 736 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 ACTRT3Q9BYD9 372 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 TPSD1Q9BZJ3 242 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 PRDM16Q9HAZ2 1276 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 ZBTB26Q9HCK0 441 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 INTS13Q9NVM9 706 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 PARPBPQ9NWS1 579 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 GPR52Q9Y2T5 361 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.11□□□□□ -1.59
NIPBL-207ENST00000513819 SNX14Q9Y5W7 946 aa5.11□□□□□ -1.59
NIPBL-207ENST00000513819 AGPSO00116 658 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 LMNAP02545 664 aaKnown RBP5.1□□□□□ -1.59
NIPBL-207ENST00000513819 ERBB2P04626 1255 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 ARP10275 920 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 LAG3P18627 525 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 YY1P25490 414 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms