RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 RMND5AQ9H871 391 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 ASAH2Q9NR71 780 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 LRRC4BQ9NT99 713 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 PRKAG3Q9UGI9 489 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 SLC9A8Q9Y2E8 581 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 HYKKA2RU49 373 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 PHF20L1A8MW92 1017 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 CASKO14936 926 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 RBP3P10745 1247 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 RPL9P32969 192 aaKnown RBP9.25□□□□□ -0.93
VCAN-208ENST00000512590 MCAMP43121 646 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 SESN2P58004 480 aaPredicted RBP9.25□□□□□ -0.93
VCAN-208ENST00000512590 UGP2Q16851 508 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 BTNL9Q6UXG8 535 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 SP8Q8IXZ3 490 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 CLEC4FQ8N1N0 589 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 DPY30Q9C005 99 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 AVENQ9NQS1 362 aaPredicted RBP9.25□□□□□ -0.93
VCAN-208ENST00000512590 URADA6NGE7 173 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 KMOO15229 486 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 TRIM13O60858 407 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 GUCY1B2O75343 617 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 IFNA14P01570 189 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 CYP17A1P05093 508 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 CYP2A7P20853 494 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 YWHABP31946 246 aaKnown RBP9.25□□□□□ -0.93
VCAN-208ENST00000512590 EPHB4P54760 987 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 ARF5P84085 180 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 USP10Q14694 798 aaKnown RBP9.25□□□□□ -0.93
VCAN-208ENST00000512590 HSPBP1Q9NZL4 362 aa9.25□□□□□ -0.93
VCAN-208ENST00000512590 PEX12O00623 359 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 CDC25AP30304 524 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 AXLP30530 894 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 SLCO1A2P46721 670 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 GNGT1P63211 74 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 CNGA2Q16280 664 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 FAM46CQ5VWP2 391 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 UNC45BQ8IWX7 931 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 CHPFQ8IZ52 775 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 GUF1Q8N442 669 aaKnown RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 SYT2Q8N9I0 419 aaPredicted RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 UXS1Q8NBZ7 420 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 OR5T3Q8NGG3 340 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 KRT35Q92764 455 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 P2RX5Q93086 422 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 CORO1BQ9BR76 489 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 FAM135BQ49AJ0 1406 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 CCNT2O60583 730 aaKnown RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 IGSF6O95976 241 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 NR1D1P20393 614 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 FKBP3Q00688 224 aaKnown RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 MAN2A1Q16706 1144 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 CYB5D1Q6P9G0 228 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 SAMD7Q7Z3H4 446 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 SPATS2Q86XZ4 545 aaKnown RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 FAM45AQ8TCE6 357 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 ARNTL2Q8WYA1 636 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 RNF25Q96BH1 459 aaPredicted RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 IMPAD1Q9NX62 359 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 NARFQ9UHQ1 456 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 ZNF229Q9UJW7 825 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 MYO1CO00159 1063 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 PGRMC1O00264 195 aaKnown RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 SEPT4O43236 478 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 SCGNO76038 276 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 NLRP11P59045 1033 aaKnown RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 NOGQ13253 232 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 BAATQ14032 418 aaPredicted RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 LDHDQ86WU2 507 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 RASAL3Q86YV0 1011 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 MAGEC3Q8TD91 643 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 ZKSCAN4Q969J2 545 aaPredicted RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 DHTKD1Q96HY7 919 aaPredicted RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 MYOCQ99972 504 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 ADGRE3Q9BY15 652 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 GOLPH3LQ9H4A5 285 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 DCDC2Q9UHG0 476 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 RPS6KA6Q9UK32 745 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 MRTO4Q9UKD2 239 aaKnown RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 A2MP01023 1474 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 NESP48681 1621 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 TBC1D3DA0A087WVF3 549 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 TBC1D3IA0A087WXS9 549 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 TBC1D3EA0A087X179 549 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 TBC1D3KA0A087X1G2 549 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 TBC1D3FA6NER0 549 aaPredicted RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 TBC1D3LB9A6J9 549 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 TBC1D3HP0C7X1 549 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 USP4Q13107 963 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 STX3Q13277 289 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 TBC1D3GQ6DHY5 549 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 TBC1D3CQ6IPX1 549 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 PRPF39Q86UA1 669 aaKnown RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 TBC1D3Q8IZP1 549 aaPredicted RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 LPAR1Q92633 364 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 TMEM143Q96AN5 459 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 POLMQ9NP87 494 aaPredicted RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 ZMYND8Q9ULU4 1186 aaPredicted RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 A0A0G2JND7 137 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms