RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 NOD2Q9HC29 1040 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 GPRC5CQ9NQ84 441 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 CPA4Q9UI42 421 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 PCDHB1Q9Y5F3 818 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 LMTK2Q8IWU2 1503 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 ZNF804BA4D1E1 1349 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 A0A087WZ62 844 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 NOP56O00567 594 aaKnown RBP6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 GGPS1O95749 300 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 NPR1P16066 1061 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 EIF4A1P60842 406 aaKnown RBP6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 GABPB1Q06547 395 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 SGO2Q562F6 1265 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 FAXCQ5TGI0 409 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 GARNL3Q5VVW2 1013 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 ARMCX2Q7L311 632 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 ARMC8Q8IUR7 673 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 CCDC103Q8IW40 242 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 DENND6BQ8NEG7 585 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 MIEF2Q96C03 454 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 EDC3Q96F86 508 aaKnown RBP6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 SLC35A4Q96G79 324 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 RMDN2Q96LZ7 410 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 PTCHD1Q96NR3 888 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 GDF15Q99988 308 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 FDXACB1Q9BRP7 624 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 COLEC11Q9BWP8 271 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 BHLHE41Q9C0J9 482 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 ABHD16BQ9H3Z7 469 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 SYNCQ9H7C4 482 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 LMBRD1Q9NUN5 540 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 TAB2Q9NYJ8 693 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 ZMYND8Q9ULU4 1186 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 CHTOPQ9Y3Y2 248 aaKnown RBP6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 CCDC144AA2RUR9 1427 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 COL17A1Q9UMD9 1497 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 ALDH1A2O94788 518 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 SCGB1D1O95968 90 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 CPT2P23786 658 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 BMPR1AP36894 532 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 POLGP54098 1239 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 RPS3AP61247 264 aaKnown RBP6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 DSC2Q02487 901 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 LIPEQ05469 1076 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 PRKCZQ05513 592 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 TRA2AQ13595 282 aaKnown RBP eCLIP6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 RCN2Q14257 317 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 FAM187BQ17R55 369 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 ZNF792Q3KQV3 632 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 LEXMQ3ZCV2 418 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 C4orf17Q53FE4 359 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 ZNF628Q5EBL2 1059 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 ERMARDQ5T6L9 678 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 MFSD5Q6N075 450 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 LRIG3Q6UXM1 1119 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 DGLUCYQ7Z3D6 616 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 ZZZ3Q8IYH5 903 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 STAMQ92783 540 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 MR1Q95460 341 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 GDAP1L1Q96MZ0 367 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 C1orf43Q9BWL3 253 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 APOL6Q9BWW8 343 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 ACE2Q9BYF1 805 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 LRRCC1Q9C099 1032 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 GORASP2Q9H8Y8 452 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 ERVK-5Q9HDB9 667 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 POLMQ9NP87 494 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 SLC35D1Q9NTN3 355 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 DONSONQ9NYP3 566 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 SSX2IPQ9Y2D8 614 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 HS3ST4Q9Y661 456 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 CLCA3PQ9Y6N3 262 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 EFCAB6Q5THR3 1501 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 GPR89AB7ZAQ6 455 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 SMC2O95347 1197 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 ADH1CP00326 375 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 EGFRP00533 1210 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 CLEC3BP05452 202 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 GPR89BP0CG08 455 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 XRCC6P12956 609 aaKnown RBP eCLIP6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 CD247P20963 164 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 ARNTP27540 789 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 VAMP2P63027 116 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 PHC1P78364 1004 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 CETN1Q12798 172 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 SUZ12Q15022 739 aaKnown RBP6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 FSCN1Q16658 493 aaKnown RBP6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 PITRM1Q5JRX3 1037 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 ATXN7L2Q5T6C5 722 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 FAM69AQ5T7M9 428 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 KLHL17Q6TDP4 642 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 ADSSL1Q8N142 457 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 SLC4A11Q8NBS3 891 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 GPBAR1Q8TDU6 330 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 THAP4Q8WY91 577 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 EXT2Q93063 718 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 DTNBP1Q96EV8 351 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 C8orf76Q96K31 380 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 GBP5Q96PP8 586 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 ZSCAN10Q96SZ4 725 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms