RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 SLC30A9Q6PML9 568 aa8.37□□□□□ -1.07
NEK1-208ENST00000512193 SLC25A41Q8N5S1 370 aa8.37□□□□□ -1.07
NEK1-208ENST00000512193 TEX9Q8N6V9 391 aa8.37□□□□□ -1.07
NEK1-208ENST00000512193 ZNF384Q8TF68 577 aa8.37□□□□□ -1.07
NEK1-208ENST00000512193 TFB1MQ8WVM0 346 aaKnown RBP8.37□□□□□ -1.07
NEK1-208ENST00000512193 TRAPPC12Q8WVT3 735 aa8.37□□□□□ -1.07
NEK1-208ENST00000512193 EME1Q96AY2 570 aa8.37□□□□□ -1.07
NEK1-208ENST00000512193 ZBTB18Q99592 522 aa8.37□□□□□ -1.07
NEK1-208ENST00000512193 TRIM15Q9C019 465 aa8.37□□□□□ -1.07
NEK1-208ENST00000512193 AVENQ9NQS1 362 aaPredicted RBP8.37□□□□□ -1.07
NEK1-208ENST00000512193 DDIT4Q9NX09 232 aa8.37□□□□□ -1.07
NEK1-208ENST00000512193 MAP3K20Q9NYL2 800 aaKnown RBP8.37□□□□□ -1.07
NEK1-208ENST00000512193 A0A087WZ62 844 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 PMPCBO75439 489 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 SKAP2O75563 359 aaPredicted RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 HMBSP08397 361 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 SETSIPP0DME0 302 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 TGM2P21980 687 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 ADRA1DP25100 572 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 EEF1DP29692 281 aaKnown RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 ALDH5A1P51649 535 aaPredicted RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 CNTN2Q02246 1040 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 SLC15A2Q16348 729 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 UGP2Q16851 508 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 WDR49Q8IV35 697 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 FBXO16Q8IX29 292 aaPredicted RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 FAM71AQ8IYT1 594 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 GIPC2Q8TF65 315 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 ATXN2LQ8WWM7 1075 aaKnown RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 NRBF2Q96F24 287 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 CPB2Q96IY4 423 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 ELMO2Q96JJ3 720 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 OLFM3Q96PB7 478 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 FDXACB1Q9BRP7 624 aaPredicted RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 TMEM120AQ9BXJ8 343 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 CEP41Q9BYV8 373 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 TTYH3Q9C0H2 523 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 MRPL40Q9NQ50 206 aaKnown RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 PIH1D1Q9NWS0 290 aaKnown RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.36□□□□□ -1.07
NEK1-208ENST00000512193 E5RI56 91 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 VWA5AO00534 786 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 WNT10BO00744 389 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 SNX3O60493 162 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 LSM8O95777 96 aaKnown RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 CD4P01730 458 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 ACO1P21399 889 aaKnown RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 GRIK1P39086 918 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 COPAP53621 1224 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 RPL10AP62906 217 aaKnown RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 FMO1Q01740 532 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 LAMTOR4Q0VGL1 99 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 ZNF235Q14590 738 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 CNGA2Q16280 664 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 NFIL3Q16649 462 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 ATPAF2Q8N5M1 289 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 PPHLN1Q8NEY8 458 aaKnown RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 SHC3Q92529 594 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 PRCCQ92733 491 aaPredicted RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 ULK4Q96C45 1275 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 CCDC90BQ9GZT6 254 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 KIAA1683Q9H0B3 1180 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 DCLRE1BQ9H816 532 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 ARHGEF38Q9NXL2 777 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 HACD3Q9P035 362 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 POLIQ9UNA4 740 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 DNAJC16Q9Y2G8 782 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 CDY2AQ9Y6F7 541 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 CDY1Q9Y6F8 540 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 KNDC1Q76NI1 1749 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 VIRMAQ69YN4 1812 aaKnown RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 ATP9AO75110 1047 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 SLC25A27O95847 323 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 C6orf222P0C671 652 aaPredicted RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 ACADSBP45954 432 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 NUMBP49757 651 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 TEDDM1Q5T9Z0 273 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 LLGL2Q6P1M3 1020 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 FAM83AQ86UY5 434 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 C2orf69Q8N8R5 385 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 TMEM176AQ96HP8 235 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 NAF1Q96HR8 494 aaKnown RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 MRPL1Q9BYD6 325 aaKnown RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 FZD1Q9UP38 647 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 KBTBD13C9JR72 458 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 GAS2O43903 313 aaKnown RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 PTPN4P29074 926 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 GLRBP48167 497 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 BTKQ06187 659 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 ANGPTL8Q6UXH0 198 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 C15orf52Q6ZUT6 534 aaKnown RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 CCDC60Q8IWA6 550 aaPredicted RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 NUP93Q8N1F7 819 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 VCPIP1Q96JH7 1222 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 EGFL8Q99944 293 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 VPS33BQ9H267 617 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 ERVK-5Q9HDB9 667 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.36□□□□□ -1.07
NEK1-208ENST00000512193 ARMCX1Q9P291 453 aa8.36□□□□□ -1.07
NEK1-208ENST00000512193 SDR42E2A6NKP2 422 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms