RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 GPR89AB7ZAQ6 455 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 SMIM22K7EJ46 135 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 FFAR2O15552 330 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 F13A1P00488 732 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 HRGP04196 525 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 RSPH10BP0C881 870 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 GPR89BP0CG08 455 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 COL6A2P12110 1019 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 HPGDP15428 266 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 ABCG1P45844 678 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 VCPP55072 806 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 HUNKP57058 714 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 SCAND1P57086 179 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 ACTR1AP61163 376 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 MRPS15P82914 257 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 FSTL1Q12841 308 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 MAPK7Q13164 816 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 CBX3Q13185 183 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 PMS2P11Q13670 270 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 TNFAIP1Q13829 316 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 DHX34Q14147 1143 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 PIK3R6Q5UE93 754 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 NAIF1Q69YI7 327 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 MTFR2Q6P444 385 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 FAM173BQ6P4H8 233 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 LILRA6Q6PI73 481 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 VHLLQ6RSH7 139 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZNF765Q7L2R6 523 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 OSTM1Q86WC4 334 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 P3H2Q8IVL5 708 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 THNSL1Q8IYQ7 743 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 GMCL1P1Q8NEA9 526 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 LILRB4Q8NHJ6 448 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 MIPOL1Q8TD10 442 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 METTL21AQ8WXB1 218 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 TBC1D5Q92609 795 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 DIO2Q92813 273 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 OSBP2Q969R2 916 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZNF764Q96H86 408 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZBED3Q96IU2 234 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 TEKT5Q96M29 485 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 C7orf26Q96N11 449 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 PYM1Q9BRP8 204 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 SYNDIG1Q9H7V2 258 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZNF446Q9NWS9 450 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 ANGEL1Q9UNK9 670 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 AURKCQ9UQB9 309 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 SNX13Q9Y5W8 968 aa5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 POLR2AP24928 1970 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-208ENST00000511955 CNTNAP1P78357 1384 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 MYH2Q9UKX2 1941 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 A0A0D9SFI3 127 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 TCRBV5S4A2TA0A5A2 114 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 DDTLA6NHG4 134 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 NCF1BA6NI72 391 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 NCF1CA8MVU1 366 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 FOXO6A8MYZ6 492 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 TMEM229AB2RXF0 380 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 K7ESF4 209 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 L7N2F9 121 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 EFCAB14O75071 495 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 PEX11AO75192 247 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 BEST1O76090 585 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 PLGP00747 810 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 ITGB1P05556 798 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 GSNP06396 782 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 CELA3AP09093 270 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 DLDP09622 509 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 HSPA8P11142 646 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 PTPREP23469 700 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 AKT1P31749 480 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 CCT8P50990 548 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 SPAG1Q07617 926 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 PPIDQ08752 370 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 USP4Q13107 963 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 PLD1Q13393 1074 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 CAMK2DQ13557 499 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 GRM2Q14416 872 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 PFKFB4Q16877 469 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 HSP90AA4PQ58FG1 418 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 C1orf185Q5T7R7 199 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 TTC22Q5TAA0 569 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 RNF220Q5VTB9 566 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 CREB3L3Q68CJ9 461 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 SYT10Q6XYQ8 523 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 VWA5B2Q8N398 1253 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 SRBD1Q8N5C6 995 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 ADAMTS15Q8TE58 950 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 ATP6V0A1Q93050 837 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 ADAD1Q96M93 576 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 NRDE2Q9H7Z3 1164 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 IARS2Q9NSE4 1012 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 FAM53CQ9NYF3 392 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 NINJ2Q9NZG7 142 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 DNAJB9Q9UBS3 223 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 FETUBQ9UGM5 382 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 BAG5Q9UL15 447 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 LHX6Q9UPM6 363 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 CAPN7Q9Y6W3 813 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms