RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 GPR15P49685 360 aa12.44□□□□□ -0.42
RNF4-216ENST00000511859 LIG4P49917 911 aa12.44□□□□□ -0.42
RNF4-216ENST00000511859 KCNB1Q14721 858 aa12.44□□□□□ -0.42
RNF4-216ENST00000511859 TMEM132DQ14C87 1099 aa12.44□□□□□ -0.42
RNF4-216ENST00000511859 ANKRD1Q15327 319 aa12.44□□□□□ -0.42
RNF4-216ENST00000511859 DDR2Q16832 855 aa12.44□□□□□ -0.42
RNF4-216ENST00000511859 GAB4Q2WGN9 574 aa12.44□□□□□ -0.42
RNF4-216ENST00000511859 TMPRSS7Q7RTY8 843 aa12.44□□□□□ -0.42
RNF4-216ENST00000511859 NAXDQ8IW45 347 aa12.44□□□□□ -0.42
RNF4-216ENST00000511859 IGSF22Q8N9C0 903 aa12.44□□□□□ -0.42
RNF4-216ENST00000511859 SNX29Q8TEQ0 813 aa12.44□□□□□ -0.42
RNF4-216ENST00000511859 LEO1Q8WVC0 666 aaPredicted RBP12.44□□□□□ -0.42
RNF4-216ENST00000511859 FAM212AQ96EL1 285 aa12.44□□□□□ -0.42
RNF4-216ENST00000511859 ASB7Q9H672 318 aa12.44□□□□□ -0.42
RNF4-216ENST00000511859 SUSD2Q9UGT4 822 aa12.44□□□□□ -0.42
RNF4-216ENST00000511859 TCRBV21S2A2A0A5A6 115 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 KPNA7A9QM74 516 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 SLC9A3R1O14745 358 aaPredicted RBP12.43□□□□□ -0.42
RNF4-216ENST00000511859 ADAM23O75077 832 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 ZNF217O75362 1048 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 KAT7O95251 611 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 NFICP08651 508 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 CHRM1P11229 460 aaPredicted RBP12.43□□□□□ -0.42
RNF4-216ENST00000511859 GRIA2P42262 883 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 ZC2HC1CQ53FD0 456 aaPredicted RBP12.43□□□□□ -0.42
RNF4-216ENST00000511859 SDHAF4Q5VUM1 108 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 KRT79Q5XKE5 535 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 TRMT11Q7Z4G4 463 aaKnown RBP12.43□□□□□ -0.42
RNF4-216ENST00000511859 SLCO6A1Q86UG4 719 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 KCTD17Q8N5Z5 321 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 DEFB119Q8N690 84 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 C4orf32Q8N8J7 132 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 OR2I1PQ8NGU4 316 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 ACBD6Q9BR61 282 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 ZDHHC5Q9C0B5 715 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 TMLHEQ9NVH6 421 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 LARSQ9P2J5 1176 aaKnown RBP12.43□□□□□ -0.42
RNF4-216ENST00000511859 CPSF3Q9UKF6 684 aaKnown RBP12.43□□□□□ -0.42
RNF4-216ENST00000511859 C2CD2Q9Y426 696 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 C2orf78A6NCI8 922 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.43□□□□□ -0.42
RNF4-216ENST00000511859 LEFTY2O00292 366 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 ZBTB24O43167 697 aaPredicted RBP12.43□□□□□ -0.42
RNF4-216ENST00000511859 CBFA2T3O75081 653 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 GNSP15586 552 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 CYP2F1P24903 491 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 SLC6A11P48066 632 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 DHCR24Q15392 516 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 PLEKHG6Q3KR16 790 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 PREPLQ4J6C6 727 aaPredicted RBP12.43□□□□□ -0.42
RNF4-216ENST00000511859 EMC10Q5UCC4 262 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 NUDT18Q6ZVK8 323 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 LSM14AQ8ND56 463 aaKnown RBP12.43□□□□□ -0.42
RNF4-216ENST00000511859 STKLD1Q8NE28 680 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 SLC39A7Q92504 469 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 ZNF419Q96HQ0 510 aaPredicted RBP12.43□□□□□ -0.42
RNF4-216ENST00000511859 PNMA5Q96PV4 448 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 KIF2CQ99661 725 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 DPP3Q9NY33 737 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 KCND2Q9NZV8 630 aa12.43□□□□□ -0.42
RNF4-216ENST00000511859 ZNF462Q96JM2 2506 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 PTPRQQ9UMZ3 2332 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 SPTA1P02549 2419 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 A0A0B4J269 797 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 HNRNPDLO14979 420 aaKnown RBP12.42□□□□□ -0.42
RNF4-216ENST00000511859 PIGRP01833 764 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 CYP17A1P05093 508 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 TRAPPC10P48553 1259 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 NCKAP1LP55160 1127 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 ZXDBP98169 803 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 POU5F1Q01860 360 aaKnown RBP12.42□□□□□ -0.42
RNF4-216ENST00000511859 RESTQ13127 1097 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 SV2CQ496J9 727 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 TTC38Q5R3I4 469 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 SYCP2LQ5T4T6 812 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 FILIP1Q7Z7B0 1213 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 RGL4Q8IZJ4 473 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 GALNT15Q8N3T1 639 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 TRIML1Q8N9V2 468 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 NSUN7Q8NE18 718 aaKnown RBP12.42□□□□□ -0.42
RNF4-216ENST00000511859 GTF3C6Q969F1 213 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 CEP295NLQ96MC4 621 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 MSTO1Q9BUK6 570 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 FOXP1Q9H334 677 aaPredicted RBP12.42□□□□□ -0.42
RNF4-216ENST00000511859 ARHGEF4Q9NR80 690 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 PCOLCE2Q9UKZ9 415 aa12.42□□□□□ -0.42
RNF4-216ENST00000511859 CFAP46Q8IYW2 2715 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 MYO18BQ8IUG5 2567 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 IGHV1OR15-9A0A0B4J2B8 117 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 TRABD2BA6NFA1 517 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 ADH1CP00326 375 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 GABRG2P18507 467 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 PNPLA4P41247 253 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 PPP3CCP48454 512 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 SLC7A9P82251 487 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 ATP2C1P98194 919 aaPredicted RBP12.41□□□□□ -0.42
RNF4-216ENST00000511859 CYP4F3Q08477 520 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 RAD51AP2Q09MP3 1159 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 CFAP221Q4G0U5 840 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 WDR45BQ5MNZ6 344 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms