RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 MTMR12Q9C0I1 747 aa17.13■□□□□ 0.33
CXCL1-202ENST00000509101 GDAP2Q9NXN4 497 aa17.13■□□□□ 0.33
CXCL1-202ENST00000509101 EVLQ9UI08 416 aaPredicted RBP17.13■□□□□ 0.33
CXCL1-202ENST00000509101 ITGA11Q9UKX5 1188 aa17.13■□□□□ 0.33
CXCL1-202ENST00000509101 ATXN2Q99700 1313 aaKnown RBP17.13■□□□□ 0.33
CXCL1-202ENST00000509101 SCAMP3O14828 347 aaKnown RBP17.12■□□□□ 0.33
CXCL1-202ENST00000509101 ATP2C2O75185 946 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 ALDH1A2O94788 518 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 MAGEA11P43364 429 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 MAPK8P45983 427 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 LHX1P48742 406 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 PDE6CP51160 858 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 C4orf50Q6ZRC1 276 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 FILIP1Q7Z7B0 1213 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 CSGALNACT2Q8N6G5 542 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 ALLCQ8N6M5 410 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 TOP6BLQ8N6T0 577 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 OLIG1Q8TAK6 271 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 CXorf38Q8TB03 319 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 SPATA18Q8TC71 538 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 MYLPFQ96A32 169 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 SPACA7Q96KW9 195 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 SYT15Q9BQS2 421 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 MRPL44Q9H9J2 332 aaKnown RBP17.12■□□□□ 0.33
CXCL1-202ENST00000509101 TBC1D7Q9P0N9 293 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 SIX4Q9UIU6 781 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 EXOC7Q9UPT5 735 aa17.12■□□□□ 0.33
CXCL1-202ENST00000509101 PCNX2A6NKB5 2137 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 GOLGA8IPA6NC78 632 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 GOLGA8JA6NMD2 632 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 SRRM3A6NNA2 597 aaPredicted RBP17.11■□□□□ 0.33
CXCL1-202ENST00000509101 GABRDO14764 452 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 HYAL3O43820 417 aaPredicted RBP17.11■□□□□ 0.33
CXCL1-202ENST00000509101 KLF8O95600 359 aaPredicted RBP17.11■□□□□ 0.33
CXCL1-202ENST00000509101 TMEM191BP0C7N4 346 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 P2RY2P41231 377 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 USP46P62068 366 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 MRPS21P82921 87 aaKnown RBP17.11■□□□□ 0.33
CXCL1-202ENST00000509101 MESP2Q0VG99 397 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 LMAN2Q12907 356 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 SOWAHAQ2M3V2 549 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 L1TD1Q5T7N2 865 aaKnown RBP17.11■□□□□ 0.33
CXCL1-202ENST00000509101 LMBRD2Q68DH5 695 aaPredicted RBP17.11■□□□□ 0.33
CXCL1-202ENST00000509101 LPCAT2Q7L5N7 544 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 TMEFF1Q8IYR6 380 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 FRMD1Q8N878 549 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 TXNDC5Q8NBS9 432 aaKnown RBP17.11■□□□□ 0.33
CXCL1-202ENST00000509101 WHAMMQ8TF30 809 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 ACCSQ96QU6 501 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 FNBP1Q96RU3 617 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 STRA6Q9BX79 667 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 NUSAP1Q9BXS6 441 aaKnown RBP17.11■□□□□ 0.33
CXCL1-202ENST00000509101 ZDHHC4Q9NPG8 344 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 TRPM5Q9NZQ8 1165 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 BCCIPQ9P287 314 aaKnown RBP eCLIP17.11■□□□□ 0.33
CXCL1-202ENST00000509101 MAGEC2Q9UBF1 373 aaPredicted RBP17.11■□□□□ 0.33
CXCL1-202ENST00000509101 DMXL2Q8TDJ6 3036 aa17.11■□□□□ 0.33
CXCL1-202ENST00000509101 ANKRD11Q6UB99 2663 aaPredicted RBP17.1■□□□□ 0.33
CXCL1-202ENST00000509101 PCDH15Q96QU1 1955 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 NBEAQ8NFP9 2946 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 SGK1O00141 431 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 MAP3K13O43283 966 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 GCNT3O95395 438 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 BMP15O95972 392 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 ENGP17813 658 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 BDNFP23560 247 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 TIE1P35590 1138 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 GRIK1P39086 918 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 PTGER3P43115 390 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 SLC6A11P48066 632 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 RBP5P82980 135 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 KDSRQ06136 332 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 FAM171BQ6P995 826 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 IL17RCQ8NAC3 791 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 SPATA17Q96L03 361 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 SLC32A1Q9H598 525 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 PDE11AQ9HCR9 933 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 CRTAC1Q9NQ79 661 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 TMEM74BQ9NUR3 256 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 SMPD4Q9NXE4 827 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 MBD1Q9UIS9 605 aaPredicted RBP17.1■□□□□ 0.33
CXCL1-202ENST00000509101 CPQQ9Y646 472 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 ITPR1Q14643 2758 aa17.1■□□□□ 0.33
CXCL1-202ENST00000509101 SPAARA0A1B0GVQ0 90 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 MYMKA6NI61 221 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 TNFRSF10BO14763 440 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 KAT7O95251 611 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 LDHAP00338 332 aaKnown RBP17.09■□□□□ 0.33
CXCL1-202ENST00000509101 APODP05090 189 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 CHRM1P11229 460 aaPredicted RBP17.09■□□□□ 0.33
CXCL1-202ENST00000509101 LMO2P25791 158 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 ANXA13P27216 316 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 CASP5P51878 434 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 CYP27A1Q02318 531 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 RESTQ13127 1097 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 DHCR24Q15392 516 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 VSTM1Q6UX27 236 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 DENND5BQ6ZUT9 1274 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 C12orf40Q86WS4 652 aa17.09■□□□□ 0.33
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