RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 C18orf8Q96DM3 657 aa10.96□□□□□ -0.65
RFC1-211ENST00000509084 B3GALT6Q96L58 329 aa10.96□□□□□ -0.65
RFC1-211ENST00000509084 CEP295NLQ96MC4 621 aa10.96□□□□□ -0.65
RFC1-211ENST00000509084 ALS2CR12Q96Q35 445 aa10.96□□□□□ -0.65
RFC1-211ENST00000509084 TMEM209Q96SK2 561 aa10.96□□□□□ -0.65
RFC1-211ENST00000509084 C11orf70Q9BRQ4 267 aa10.96□□□□□ -0.65
RFC1-211ENST00000509084 THAP2Q9H0W7 228 aa10.96□□□□□ -0.65
RFC1-211ENST00000509084 CSNK1G1Q9HCP0 422 aa10.96□□□□□ -0.65
RFC1-211ENST00000509084 RYDENQ9NUL5 291 aaKnown RBP10.96□□□□□ -0.65
RFC1-211ENST00000509084 CNOT8Q9UFF9 292 aaKnown RBP10.96□□□□□ -0.65
RFC1-211ENST00000509084 IRAK3Q9Y616 596 aa10.96□□□□□ -0.65
RFC1-211ENST00000509084 CDY1Q9Y6F8 540 aa10.96□□□□□ -0.65
RFC1-211ENST00000509084 MTMR11A4FU01 709 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 CLDN5O00501 218 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 C2CD2LO14523 706 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 SART1O43290 800 aaKnown RBP10.95□□□□□ -0.66
RFC1-211ENST00000509084 KIF5CO60282 957 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 ZNF500O60304 480 aaPredicted RBP10.95□□□□□ -0.66
RFC1-211ENST00000509084 CYP1A2P05177 515 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 ADH1AP07327 375 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 OR4Q2P0C623 313 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 BDNFP23560 247 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 SSTR3P32745 418 aaPredicted RBP10.95□□□□□ -0.66
RFC1-211ENST00000509084 SCNN1AP37088 669 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 GABRB2P47870 512 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 RPL34P49207 117 aaKnown RBP10.95□□□□□ -0.66
RFC1-211ENST00000509084 NDUFV1P49821 464 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 HADHBP55084 474 aaKnown RBP10.95□□□□□ -0.66
RFC1-211ENST00000509084 ARPP19P56211 112 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 ROR1Q01973 937 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 PTP4A2Q12974 167 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 ZNF268Q14587 947 aaPredicted RBP10.95□□□□□ -0.66
RFC1-211ENST00000509084 SMC1AQ14683 1233 aaKnown RBP10.95□□□□□ -0.66
RFC1-211ENST00000509084 PTPN14Q15678 1187 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 DNAJC24Q6P3W2 148 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 MMS22LQ6ZRQ5 1243 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 PAQR9Q6ZVX9 377 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 TMC7Q7Z402 723 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 LRRTM3Q86VH5 581 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 WDTC1Q8N5D0 677 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 C3orf20Q8ND61 904 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 UBE2Q2Q8WVN8 375 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 C17orf80Q9BSJ5 609 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 EMILIN2Q9BXX0 1053 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 SLC4A5Q9BY07 1137 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 PACSIN1Q9BY11 444 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 LACRTQ9GZZ8 138 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 LMAN2LQ9H0V9 348 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 LRRC4Q9HBW1 653 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 RXFP1Q9HBX9 757 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 NGRNQ9NPE2 291 aaKnown RBP10.95□□□□□ -0.66
RFC1-211ENST00000509084 LZTFL1Q9NQ48 299 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 TLR9Q9NR96 1032 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 ST7Q9NRC1 585 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 PARVAQ9NVD7 372 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 TMLHEQ9NVH6 421 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 ABI2Q9NYB9 513 aaPredicted RBP10.95□□□□□ -0.66
RFC1-211ENST00000509084 AFF4Q9UHB7 1163 aaKnown RBP10.95□□□□□ -0.66
RFC1-211ENST00000509084 GBF1Q92538 1859 aa10.95□□□□□ -0.66
RFC1-211ENST00000509084 PTPRDP23468 1912 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 PLXNA4Q9HCM2 1894 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 RCCD1A6NED2 376 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 USP27XA6NNY8 438 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 GRXCR1A8MXD5 290 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 MTA2O94776 668 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 FBXO21O94952 628 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 C1RP00736 705 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 DESP17661 470 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 RRM1P23921 792 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 OR1D2P34982 312 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 GRIK1P39086 918 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 ARHGAP25P42331 645 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 TUFMP49411 452 aaKnown RBP10.94□□□□□ -0.66
RFC1-211ENST00000509084 NAP1L1P55209 391 aaKnown RBP10.94□□□□□ -0.66
RFC1-211ENST00000509084 MAP3K7CLP57077 242 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 RPL10AP62906 217 aaKnown RBP10.94□□□□□ -0.66
RFC1-211ENST00000509084 SMAD3P84022 425 aaKnown RBP10.94□□□□□ -0.66
RFC1-211ENST00000509084 RAB33AQ14088 237 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 CCDC142Q17RM4 750 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 PPP2R2DQ66LE6 453 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 FAM109BQ6ICB4 259 aaPredicted RBP10.94□□□□□ -0.66
RFC1-211ENST00000509084 PLEKHA7Q6IQ23 1121 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 PMF1Q6P1K2 205 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 TMEM110Q86TL2 294 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 PIGZQ86VD9 579 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 SYCE1Q8N0S2 351 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 SIX6OS1Q8N1H7 587 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 SCML4Q8N228 414 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 TRIM58Q8NG06 486 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 ZNF461Q8TAF7 563 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 SPPL3Q8TCT6 385 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 POF1BQ8WVV4 589 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 C8orf48Q96LL4 319 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 CPXM1Q96SM3 734 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 SMOQ99835 787 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 TCF25Q9BQ70 676 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 LPIN3Q9BQK8 851 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 CLSTN3Q9BQT9 956 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 TRIM62Q9BVG3 475 aa10.94□□□□□ -0.66
RFC1-211ENST00000509084 SELENOOQ9BVL4 669 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms