RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 MXD3Q9BW11 206 aa4.74□□□□□ -1.65
SMARCA5-202ENST00000508573 COLEC11Q9BWP8 271 aa4.74□□□□□ -1.65
SMARCA5-202ENST00000508573 C14orf93Q9H972 538 aaKnown RBP4.74□□□□□ -1.65
SMARCA5-202ENST00000508573 CCDC177Q9NQR7 707 aaPredicted RBP4.74□□□□□ -1.65
SMARCA5-202ENST00000508573 KRT84Q9NSB2 600 aa4.74□□□□□ -1.65
SMARCA5-202ENST00000508573 TMEM160Q9NX00 188 aa4.74□□□□□ -1.65
SMARCA5-202ENST00000508573 SLC39A10Q9ULF5 831 aa4.74□□□□□ -1.65
SMARCA5-202ENST00000508573 PCDHGB4Q9UN71 923 aa4.74□□□□□ -1.65
SMARCA5-202ENST00000508573 STXBP5LQ9Y2K9 1186 aa4.74□□□□□ -1.65
SMARCA5-202ENST00000508573 A0A0B4J269 797 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 A0A1W2PPC4 97 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 hCG_1807616A0A1W2PRN6 198 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 A0A1W2PRX2 142 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 AQP12BA6NM10 295 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 ZNF561-AS1K7EIQ3 104 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 IPO8O15397 1037 aaKnown RBP4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 IL18RAPO95256 599 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 HDCP19113 662 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 EDNRBP24530 442 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 ATP5DP30049 168 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 TRPC1P48995 793 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 POLR2FP61218 127 aaKnown RBP4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 LACTBP83111 547 aaPredicted RBP4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 RIN1Q13671 783 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 DAG1Q14118 895 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 WSCD2Q2TBF2 565 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 C5orf22Q49AR2 442 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 FAM47CQ5HY64 1035 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 LAIR1Q6GTX8 287 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 KLHL10Q6JEL2 608 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 ACAD10Q6JQN1 1059 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 LIN54Q6MZP7 749 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 IL27RAQ6UWB1 636 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 RAPH1Q70E73 1250 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 OTOP1Q7RTM1 612 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 NUP54Q7Z3B4 507 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 KCNK18Q7Z418 384 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 CCDC91Q7Z6B0 441 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 SLC44A2Q8IWA5 706 aaPredicted RBP4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 OR8H3Q8N146 312 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 TRIML1Q8N9V2 468 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 HIPK4Q8NE63 616 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 CEP70Q8NHQ1 597 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 PPP1R14CQ8TAE6 165 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 ZNF606Q8WXB4 792 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 ST8SIA4Q92187 359 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 MUL1Q969V5 352 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 ZNF566Q969W8 418 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 ZNF845Q96IR2 970 aaPredicted RBP4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 EYA3Q99504 573 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 MPHOSPH9Q99550 1183 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 HEPHQ9BQS7 1158 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 PDCD2LQ9BRP1 358 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 ZMAT3Q9HA38 289 aaKnown RBP4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 SMURF1Q9HCE7 757 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 KCTD5Q9NXV2 234 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 SRP68Q9UHB9 627 aaKnown RBP4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 MAGEL2Q9UJ55 1249 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 RPS6KA6Q9UK32 745 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 FEM1BQ9UK73 627 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 FBXL5Q9UKA1 691 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 COG5Q9UP83 839 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 LIMCH1Q9UPQ0 1083 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 CEP83Q9Y592 693 aa4.73□□□□□ -1.65
SMARCA5-202ENST00000508573 A0A088AWK7 358 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 PMS2P1A4D2B8 440 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 DVL2O14641 736 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 FOXN1O15353 648 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 KDM1AO60341 852 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 SRGAP2O75044 1071 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 ERAL1O75616 437 aaKnown RBP4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 TPPPO94811 219 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 ENDOD1O94919 500 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 APBB3O95704 486 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 MLYCDO95822 493 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 PEX11BO96011 259 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 JUPP14923 745 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 KRT4P19013 534 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 ENPP1P22413 925 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 SSR1P43307 286 aaKnown RBP4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 SCNN1GP51170 649 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 ARF3P61204 181 aaPredicted RBP4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 ARF1P84077 181 aaKnown RBP4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 SLC25A3Q00325 362 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 FMO1Q01740 532 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 TNIP1Q15025 636 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 ZKSCAN8Q15776 578 aaPredicted RBP4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 SHROOM1Q2M3G4 852 aaPredicted RBP4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 GPR139Q6DWJ6 353 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 TANGO2Q6ICL3 276 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 CRTC1Q6UUV9 634 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 GALNT7Q86SF2 657 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 SESTD1Q86VW0 696 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 CHD1LQ86WJ1 897 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 CCDC170Q8IYT3 715 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 NUP93Q8N1F7 819 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 LRRC71Q8N4P6 559 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 NGEFQ8N5V2 710 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 C2orf69Q8N8R5 385 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms