RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 DSEQ9UL01 958 aa17.43■□□□□ 0.38
DDX41-207ENST00000507900 CDH9Q9ULB4 789 aa17.43■□□□□ 0.38
DDX41-207ENST00000507900 NBNO60934 754 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 ATP2C2O75185 946 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 RALAP11233 206 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 COILP38432 576 aaPredicted RBP17.42■□□□□ 0.38
DDX41-207ENST00000507900 CARSP49589 748 aaKnown RBP17.42■□□□□ 0.38
DDX41-207ENST00000507900 DSC1Q08554 894 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 CLLU1OSQ5K130 101 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 TRNP1Q6NT89 227 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 TTC27Q6P3X3 843 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 DCLRE1AQ6PJP8 1040 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 PAQR9Q6ZVX9 377 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 SLC26A9Q7LBE3 791 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 CCDC50Q8IVM0 306 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 KHSRPQ92945 711 aaKnown RBP eCLIP17.42■□□□□ 0.38
DDX41-207ENST00000507900 HINFPQ9BQA5 517 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 SYT15Q9BQS2 421 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 CRTAC1Q9NQ79 661 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 HOMER3Q9NSC5 361 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 TMEM161AQ9NX61 479 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 OGFRQ9NZT2 677 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 INPP5FQ9Y2H2 1132 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 UTP11Q9Y3A2 253 aaKnown RBP17.42■□□□□ 0.38
DDX41-207ENST00000507900 BRCA2P51587 3418 aa17.42■□□□□ 0.38
DDX41-207ENST00000507900 ESYT3A0FGR9 886 aa17.41■□□□□ 0.38
DDX41-207ENST00000507900 ARHGEF37A1IGU5 675 aa17.41■□□□□ 0.38
DDX41-207ENST00000507900 RNF8O76064 485 aa17.41■□□□□ 0.38
DDX41-207ENST00000507900 B3GAT3O94766 335 aa17.41■□□□□ 0.38
DDX41-207ENST00000507900 KRT1P04264 644 aa17.41■□□□□ 0.38
DDX41-207ENST00000507900 NPR3P17342 541 aa17.41■□□□□ 0.38
DDX41-207ENST00000507900 PCSK1P29120 753 aa17.41■□□□□ 0.38
DDX41-207ENST00000507900 SLC8A3P57103 927 aa17.41■□□□□ 0.38
DDX41-207ENST00000507900 TXNRD3NBQ6F5E7 133 aa17.41■□□□□ 0.38
DDX41-207ENST00000507900 CCDC137Q6PK04 289 aaKnown RBP17.41■□□□□ 0.38
DDX41-207ENST00000507900 JAMLQ86YT9 394 aa17.41■□□□□ 0.38
DDX41-207ENST00000507900 RXFP2Q8WXD0 754 aa17.41■□□□□ 0.38
DDX41-207ENST00000507900 KCTD13Q8WZ19 329 aa17.41■□□□□ 0.38
DDX41-207ENST00000507900 APBB2Q92870 758 aa17.41■□□□□ 0.38
DDX41-207ENST00000507900 RNF208Q9H0X6 261 aa17.41■□□□□ 0.38
DDX41-207ENST00000507900 WBP1LQ9NX94 342 aa17.41■□□□□ 0.38
DDX41-207ENST00000507900 KANSL3Q9P2N6 904 aa17.41■□□□□ 0.38
DDX41-207ENST00000507900 RASAL2Q9UJF2 1139 aa17.41■□□□□ 0.38
DDX41-207ENST00000507900 EFR3BQ9Y2G0 817 aa17.41■□□□□ 0.38
DDX41-207ENST00000507900 TMEM189-UBE2V1I3L0A0 370 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 PIK3R2O00459 728 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 ACAT1P24752 427 aaKnown RBP17.4■□□□□ 0.38
DDX41-207ENST00000507900 ECHS1P30084 290 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 GJC1P36383 396 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 FLT3P36888 993 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 DRG2P55039 364 aaKnown RBP17.4■□□□□ 0.38
DDX41-207ENST00000507900 SMC1AQ14683 1233 aaKnown RBP17.4■□□□□ 0.38
DDX41-207ENST00000507900 TAZQ16635 292 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 ATP13A4Q4VNC1 1196 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 MDH1BQ5I0G3 518 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 NOMO2Q5JPE7 1267 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 DUPD1Q68J44 220 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 SPOCD1Q6ZMY3 1216 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 ANKRD33Q7Z3H0 272 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 ANKS1BQ7Z6G8 1248 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 URGCPQ8TCY9 931 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 RSPH1Q8WYR4 309 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 SUSD3Q96L08 255 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 NCAPGQ9BPX3 1015 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 ERP44Q9BS26 406 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 CRISPLD2Q9H0B8 497 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 FAM114A2Q9NRY5 505 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 NFU1Q9UMS0 254 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 PTPRDP23468 1912 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 C3orf70A6NLC5 250 aaPredicted RBP17.4■□□□□ 0.38
DDX41-207ENST00000507900 PDGFRAP16234 1089 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 TYMPP19971 482 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 IL1R2P27930 398 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 MIPP30301 263 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 CDKN2BP42772 138 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 TFDP3Q5H9I0 405 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 MFSD7Q6UXD7 560 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 CLEC20AQ6ZU45 233 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 PIGZQ86VD9 579 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 METTL23Q86XA0 190 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 SCUBE3Q8IX30 993 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 CMASQ8NFW8 434 aaPredicted RBP17.4■□□□□ 0.38
DDX41-207ENST00000507900 MYCBPAPQ8TBZ2 947 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 RAPGEF5Q92565 580 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 RNF25Q96BH1 459 aaPredicted RBP17.4■□□□□ 0.38
DDX41-207ENST00000507900 RTP3Q9BQQ7 232 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 ACBD6Q9BR61 282 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 B3GNT5Q9BYG0 378 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 DCLK3Q9C098 648 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 PLEKHA4Q9H4M7 779 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 KLHL11Q9NVR0 708 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 PATJQ8NI35 1801 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 NLRC5Q86WI3 1866 aa17.4■□□□□ 0.38
DDX41-207ENST00000507900 hCG_1818297A0A087WSY0 165 aa17.39■□□□□ 0.37
DDX41-207ENST00000507900 TJP3O95049 919 aa17.39■□□□□ 0.37
DDX41-207ENST00000507900 PARNO95453 639 aaKnown RBP17.39■□□□□ 0.37
DDX41-207ENST00000507900 TRUB2O95900 331 aaKnown RBP17.39■□□□□ 0.37
DDX41-207ENST00000507900 FAM200BP0CF97 657 aa17.39■□□□□ 0.37
DDX41-207ENST00000507900 PTPN9P43378 593 aa17.39■□□□□ 0.37
DDX41-207ENST00000507900 MNX1P50219 401 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms