RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 TMEM134Q9H6X4 195 aa9.62□□□□□ -0.87
COPS4-205ENST00000507376 IL21RQ9HBE5 538 aa9.62□□□□□ -0.87
COPS4-205ENST00000507376 CACNA2D2Q9NY47 1150 aa9.62□□□□□ -0.87
COPS4-205ENST00000507376 GCNT4Q9P109 453 aa9.62□□□□□ -0.87
COPS4-205ENST00000507376 UBQLN1Q9UMX0 589 aaKnown RBP9.62□□□□□ -0.87
COPS4-205ENST00000507376 TP53BP1Q12888 1972 aaPredicted RBP9.62□□□□□ -0.87
COPS4-205ENST00000507376 TNFRSF10BO14763 440 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 GJB3O75712 270 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 CDKL5O76039 1030 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 CKMP06732 381 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 CD46P15529 392 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 MAOBP27338 520 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 MATR3P43243 847 aaKnown RBP eCLIP9.61□□□□□ -0.87
COPS4-205ENST00000507376 USP46P62068 366 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 FAM160A1Q05DH4 1040 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 PPP2R3AQ06190 1150 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 LMAN2Q12907 356 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 PDGFRLQ15198 375 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 TAF12Q16514 161 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 ME3Q16798 604 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 FBXO43Q4G163 708 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 SPATA1Q5VX52 437 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 CCNI2Q6ZMN8 369 aaPredicted RBP9.61□□□□□ -0.87
COPS4-205ENST00000507376 C1orf186Q6ZWK4 172 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 APBB1IPQ7Z5R6 666 aaPredicted RBP9.61□□□□□ -0.87
COPS4-205ENST00000507376 C4orf32Q8N8J7 132 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 ZSWIM2Q8NEG5 633 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 CCDC86Q9H6F5 360 aaKnown RBP9.61□□□□□ -0.87
COPS4-205ENST00000507376 KIF9Q9HAQ2 790 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 SMPD4Q9NXE4 827 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 CALCOCO1Q9P1Z2 691 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 BCCIPQ9P287 314 aaKnown RBP eCLIP9.61□□□□□ -0.87
COPS4-205ENST00000507376 SLCO1B1Q9Y6L6 691 aa9.61□□□□□ -0.87
COPS4-205ENST00000507376 KNL1Q8NG31 2342 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 MYO18BQ8IUG5 2567 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 PIRO00625 290 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 CYB561D2O14569 222 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 OPHN1O60890 802 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 PRPF40AO75400 957 aaKnown RBP9.6□□□□□ -0.87
COPS4-205ENST00000507376 FGF19O95750 216 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 CYP11A1P05108 521 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 XBP1P17861 261 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 GABRG2P18507 467 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 KIR2DL1P43626 348 aaPredicted RBP9.6□□□□□ -0.87
COPS4-205ENST00000507376 RPL6Q02878 288 aaKnown RBP9.6□□□□□ -0.87
COPS4-205ENST00000507376 ZRSR1Q15695 479 aaKnown RBP9.6□□□□□ -0.87
COPS4-205ENST00000507376 ARMCX5Q6P1M9 558 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 PHTF2Q8N3S3 785 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 ERMNQ8TAM6 284 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 ADAMTS14Q8WXS8 1223 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 MRPS31Q92665 395 aaKnown RBP9.6□□□□□ -0.87
COPS4-205ENST00000507376 ATP2A3Q93084 1043 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 WBP2Q969T9 261 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 HSPA12BQ96MM6 686 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 ACOX2Q99424 681 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 PKMYT1Q99640 499 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 TOR4AQ9NXH8 423 aa9.6□□□□□ -0.87
COPS4-205ENST00000507376 NUMA1Q14980 2115 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 COL5A1P20908 1838 aaPredicted RBP9.59□□□□□ -0.87
COPS4-205ENST00000507376 ANO9A1A5B4 782 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 GOLGA8CPA6NN73 597 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 CLDN3O15551 220 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 AP1G2O75843 785 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 NOL4O94818 638 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 CLTAP09496 248 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 PLA2G2AP14555 144 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 CYP3A5P20815 502 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 ITPKBP27987 946 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 ACOT2P49753 483 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 ZNF268Q14587 947 aaPredicted RBP9.59□□□□□ -0.87
COPS4-205ENST00000507376 PTPAQ15257 358 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 TRIP6Q15654 476 aaKnown RBP9.59□□□□□ -0.87
COPS4-205ENST00000507376 TTC38Q5R3I4 469 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 LARP1BQ659C4 914 aaKnown RBP9.59□□□□□ -0.87
COPS4-205ENST00000507376 FILIP1Q7Z7B0 1213 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 NAXDQ8IW45 347 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 PGBD3Q8N328 593 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 PIP4K2CQ8TBX8 421 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 WHAMMQ8TF30 809 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 GTF3C6Q969F1 213 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 ZDHHC16Q969W1 377 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 BICD1Q96G01 975 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 PNMA5Q96PV4 448 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 BRMS1Q9HCU9 246 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 TMEM30AQ9NV96 361 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 LRWD1Q9UFC0 647 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 L1RE1Q9UN81 338 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 CYP8B1Q9UNU6 501 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 RAD54BQ9Y620 910 aa9.59□□□□□ -0.87
COPS4-205ENST00000507376 TRAV19A0A0A6YYK7 116 aa9.58□□□□□ -0.88
COPS4-205ENST00000507376 IGHV1OR15-9A0A0B4J2B8 117 aa9.58□□□□□ -0.88
COPS4-205ENST00000507376 UPK3BL1B0FP48 263 aa9.58□□□□□ -0.88
COPS4-205ENST00000507376 ANKRD63C9JTQ0 380 aa9.58□□□□□ -0.88
COPS4-205ENST00000507376 UPK3BL2E5RIL1 263 aa9.58□□□□□ -0.88
COPS4-205ENST00000507376 TK2O00142 265 aa9.58□□□□□ -0.88
COPS4-205ENST00000507376 LEFTY2O00292 366 aa9.58□□□□□ -0.88
COPS4-205ENST00000507376 CBFA2T3O75081 653 aa9.58□□□□□ -0.88
COPS4-205ENST00000507376 ATP2C2O75185 946 aa9.58□□□□□ -0.88
COPS4-205ENST00000507376 SERPINF2P08697 491 aa9.58□□□□□ -0.88
COPS4-205ENST00000507376 ATXN1LP0C7T5 689 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms