RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 CAPN11Q9UMQ6 739 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 INSL5Q9Y5Q6 135 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 M0QYV0 167 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 PAEPP09466 180 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 GJA1P17302 382 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 KCNA5P22460 613 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 PGFP49763 221 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 USP46P62068 366 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 CREMQ03060 361 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 TFF2Q03403 129 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 PTK2Q05397 1052 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 CNGA2Q16280 664 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 ASIC2Q16515 512 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 CTC1Q2NKJ3 1217 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 PPM1LQ5SGD2 360 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 LIN9Q5TKA1 542 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 SFMBT2Q5VUG0 894 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 C4orf50Q6ZRC1 276 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 CLEC20AQ6ZU45 233 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 TCEAL8Q8IYN2 117 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 WDTC1Q8N5D0 677 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 DDX1Q92499 740 aaKnown RBP9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 SECISBP2LQ93073 1101 aaKnown RBP9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 RNF166Q96A37 237 aaPredicted RBP9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 ZNF707Q96C28 371 aaPredicted RBP9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 NUP58Q9BVL2 599 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 NOCTQ9UK39 431 aaKnown RBP9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 MAGED2Q9UNF1 606 aaPredicted RBP9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 LUC7L2Q9Y383 392 aaKnown RBP9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 ITIH6Q6UXX5 1313 aa9.35□□□□□ -0.91
SCAMP1-202ENST00000506858 ZMYND10O75800 440 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 FAM200BP0CF97 657 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 ZBED6P86452 979 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 FIGNQ5HY92 759 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 ARHGAP17Q68EM7 881 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 ANKRD54Q6NXT1 300 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 LCLAT1Q6UWP7 414 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 ZNF571Q7Z3V5 609 aaPredicted RBP9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 GRASPQ7Z6J2 395 aaPredicted RBP9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 DNAJB7Q7Z6W7 309 aaPredicted RBP9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 TTC39CQ8N584 583 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 MAFAQ8NHW3 353 aaPredicted RBP9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 OLIG1Q8TAK6 271 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 SPPL2BQ8TCT7 592 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 EPS8L1Q8TE68 723 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 CPA5Q8WXQ8 436 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 PPP2R3CQ969Q6 453 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 CHP1Q99653 195 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 DUSP16Q9BY84 665 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 HAUS4Q9H6D7 363 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 ZNF334Q9HCZ1 680 aaPredicted RBP9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 SEPT11Q9NVA2 429 aaKnown RBP9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 MYH10P35580 1976 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 SLC38A8A6NNN8 435 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 TMCO5BA8MYB1 307 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 HHLA1C9JL84 531 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 TK2O00142 265 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 MFAP3LO75121 409 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 LRG1P02750 347 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 NPR3P17342 541 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 RFX1P22670 979 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 SP100P23497 879 aaPredicted RBP9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 ALDH1A3P47895 512 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 FMO1Q01740 532 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 PLD1Q13393 1074 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 MAPRE1Q15691 268 aaKnown RBP9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 CFAP221Q4G0U5 840 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 PKDCCQ504Y2 493 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 HGSNATQ68CP4 663 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 PMF1Q6P1K2 205 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 WDR59Q6PJI9 974 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 PIGZQ86VD9 579 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 ZNF454Q8N9F8 522 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 TC2NQ8N9U0 490 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 ANKRD52Q8NB46 1076 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 C1orf131Q8NDD1 294 aaKnown RBP9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 SLC30A5Q8TAD4 765 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 SMG7Q92540 1137 aaKnown RBP9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 CASP10Q92851 521 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 PABPC5Q96DU9 382 aaKnown RBP9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 TCEAL4Q96EI5 215 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 SMARCD1Q96GM5 515 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 FAM81BQ96LP2 452 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 CDCA3Q99618 268 aaPredicted RBP9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 CORO1BQ9BR76 489 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 OXCT2Q9BYC2 517 aaPredicted RBP9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 PDCL3Q9H2J4 239 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 PLEKHA4Q9H4M7 779 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 TAS2R14Q9NYV8 317 aa9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 DNMT3BQ9UBC3 853 aaKnown RBP9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 CHORDC1Q9UHD1 332 aaPredicted RBP9.34□□□□□ -0.91
SCAMP1-202ENST00000506858 VCANP13611 3396 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 A0A1W2PQJ5 194 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 AKR1B15C9JRZ8 316 aaPredicted RBP9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 MYL4P12829 197 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 LCP1P13796 627 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 FERP16591 822 aa9.33□□□□□ -0.92
SCAMP1-202ENST00000506858 HMGA1P17096 107 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms