RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 TRAV19A0A0A6YYK7 116 aa16.55■□□□□ 0.24
CLDND1-211ENST00000506575 LRRN2O75325 713 aa16.55■□□□□ 0.24
CLDND1-211ENST00000506575 CKMP06732 381 aa16.55■□□□□ 0.24
CLDND1-211ENST00000506575 USP17L7P0C7H9 530 aa16.55■□□□□ 0.24
CLDND1-211ENST00000506575 GLULP15104 373 aa16.55■□□□□ 0.24
CLDND1-211ENST00000506575 MAGEA9P43362 315 aa16.55■□□□□ 0.24
CLDND1-211ENST00000506575 PDE6CP51160 858 aa16.55■□□□□ 0.24
CLDND1-211ENST00000506575 MCCD1P59942 119 aaPredicted RBP16.55■□□□□ 0.24
CLDND1-211ENST00000506575 IFRD2Q12894 506 aaPredicted RBP16.55■□□□□ 0.24
CLDND1-211ENST00000506575 ORC1Q13415 861 aa16.55■□□□□ 0.24
CLDND1-211ENST00000506575 ANGPT1Q15389 498 aa16.55■□□□□ 0.24
CLDND1-211ENST00000506575 WDR44Q5JSH3 913 aa16.55■□□□□ 0.24
CLDND1-211ENST00000506575 ZC3H3Q8IXZ2 948 aaKnown RBP16.55■□□□□ 0.24
CLDND1-211ENST00000506575 USP13Q92995 863 aaPredicted RBP16.55■□□□□ 0.24
CLDND1-211ENST00000506575 SMARCD1Q96GM5 515 aa16.55■□□□□ 0.24
CLDND1-211ENST00000506575 ZFYVE19Q96K21 471 aa16.55■□□□□ 0.24
CLDND1-211ENST00000506575 LRRC3BQ96PB8 259 aa16.55■□□□□ 0.24
CLDND1-211ENST00000506575 APOBEC3GQ9HC16 384 aaKnown RBP16.55■□□□□ 0.24
CLDND1-211ENST00000506575 DMAP1Q9NPF5 467 aaPredicted RBP16.55■□□□□ 0.24
CLDND1-211ENST00000506575 FAM86C1Q9NVL1 165 aa16.55■□□□□ 0.24
CLDND1-211ENST00000506575 DLGAP2Q9P1A6 1054 aa16.55■□□□□ 0.24
CLDND1-211ENST00000506575 HMGXB4Q9UGU5 601 aa16.55■□□□□ 0.24
CLDND1-211ENST00000506575 MTF2Q9Y483 593 aaPredicted RBP16.55■□□□□ 0.24
CLDND1-211ENST00000506575 BICDL2A1A5D9 508 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 ARNTLO00327 626 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 AP1G2O75843 785 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 RTN3O95197 1032 aaPredicted RBP16.54■□□□□ 0.24
CLDND1-211ENST00000506575 CD44P16070 742 aaKnown RBP16.54■□□□□ 0.24
CLDND1-211ENST00000506575 CD58P19256 250 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 TARSP26639 723 aaKnown RBP16.54■□□□□ 0.24
CLDND1-211ENST00000506575 PPP3CCP48454 512 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 CACNA2D1P54289 1103 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 USP46P62068 366 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 INCA1Q0VD86 236 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 MORC3Q14149 939 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 ZNF268Q14587 947 aaPredicted RBP16.54■□□□□ 0.24
CLDND1-211ENST00000506575 CCDC40Q4G0X9 1142 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 CC2D1AQ6P1N0 951 aaPredicted RBP16.54■□□□□ 0.24
CLDND1-211ENST00000506575 C1orf228Q6PIY5 440 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 NUP93Q8N1F7 819 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 CRYBG2Q8N1P7 616 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 TTC16Q8NEE8 873 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 NELFBQ8WX92 580 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 FAM3CQ92520 227 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 MSANTD3Q96H12 275 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 CEP63Q96MT8 703 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 SLITRK1Q96PX8 696 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 TTLL2Q9BWV7 592 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 NT5C1AQ9BXI3 368 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 C8orf33Q9H7E9 229 aaPredicted RBP16.54■□□□□ 0.24
CLDND1-211ENST00000506575 METTL14Q9HCE5 456 aaKnown RBP16.54■□□□□ 0.24
CLDND1-211ENST00000506575 FAM49BQ9NUQ9 324 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 RAB20Q9NX57 234 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 NDRG2Q9UN36 371 aaKnown RBP16.54■□□□□ 0.24
CLDND1-211ENST00000506575 CCL26Q9Y258 94 aa16.54■□□□□ 0.24
CLDND1-211ENST00000506575 C2orf78A6NCI8 922 aa16.53■□□□□ 0.24
CLDND1-211ENST00000506575 ABL1P00519 1130 aa16.53■□□□□ 0.24
CLDND1-211ENST00000506575 CCDC130P13994 396 aa16.53■□□□□ 0.24
CLDND1-211ENST00000506575 MLLT6P55198 1093 aaPredicted RBP16.53■□□□□ 0.24
CLDND1-211ENST00000506575 FUKQ8N0W3 1084 aa16.53■□□□□ 0.24
CLDND1-211ENST00000506575 TTC39CQ8N584 583 aa16.53■□□□□ 0.24
CLDND1-211ENST00000506575 ARL14EPQ8N8R7 260 aaPredicted RBP16.53■□□□□ 0.24
CLDND1-211ENST00000506575 TTC8Q8TAM2 541 aa16.53■□□□□ 0.24
CLDND1-211ENST00000506575 SLC2A14Q8TDB8 520 aa16.53■□□□□ 0.24
CLDND1-211ENST00000506575 FAXDC2Q96IV6 333 aa16.53■□□□□ 0.24
CLDND1-211ENST00000506575 CYP2S1Q96SQ9 504 aa16.53■□□□□ 0.24
CLDND1-211ENST00000506575 KCNK16Q96T55 309 aa16.53■□□□□ 0.24
CLDND1-211ENST00000506575 GKN1Q9NS71 199 aa16.53■□□□□ 0.24
CLDND1-211ENST00000506575 KRT82Q9NSB4 513 aa16.53■□□□□ 0.24
CLDND1-211ENST00000506575 TMEM30AQ9NV96 361 aa16.53■□□□□ 0.24
CLDND1-211ENST00000506575 CTNND2Q9UQB3 1225 aa16.53■□□□□ 0.24
CLDND1-211ENST00000506575 HELZP42694 1942 aaKnown RBP16.53■□□□□ 0.24
CLDND1-211ENST00000506575 KIF26AQ9ULI4 1882 aaPredicted RBP16.52■□□□□ 0.24
CLDND1-211ENST00000506575 PPP1R3GB7ZBB8 358 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 CILPO75339 1184 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 PFKLP17858 780 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 HDCP19113 662 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 BMP6P22004 513 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 YWHAQP27348 245 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 ADORA2BP29275 332 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 TAF10Q12962 218 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 CAMK4Q16566 473 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 ITPRIPL2Q3MIP1 535 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 PAQR9Q6ZVX9 377 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 FRMD5Q7Z6J6 570 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 FILIP1Q7Z7B0 1213 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 ALYREFQ86V81 257 aaKnown RBP16.52■□□□□ 0.24
CLDND1-211ENST00000506575 C1orf210Q8IVY1 113 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 C12orf29Q8N999 325 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 TRIML1Q8N9V2 468 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 PDZD8Q8NEN9 1154 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 SEMA4DQ92854 862 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 FBXO32Q969P5 355 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 SPATA6Q9NWH7 488 aaPredicted RBP16.52■□□□□ 0.24
CLDND1-211ENST00000506575 GTSE1Q9NYZ3 720 aa16.52■□□□□ 0.24
CLDND1-211ENST00000506575 CACNA1IQ9P0X4 2223 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 ZFHX2Q9C0A1 2572 aaPredicted RBP16.51■□□□□ 0.23
CLDND1-211ENST00000506575 ZNF840PA6NDX5 716 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 SPECC1L-ADORA2AF8WAN1 911 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 LAMTOR5O43504 91 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms