RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 PDGFRAP16234 1089 aa12.82□□□□□ -0.36
LIN54-206ENST00000506560 SCNN1GP51170 649 aa12.82□□□□□ -0.36
LIN54-206ENST00000506560 MGAT3Q09327 533 aa12.82□□□□□ -0.36
LIN54-206ENST00000506560 PCBP1Q15365 356 aaKnown RBP eCLIP12.82□□□□□ -0.364e-6■■■□□ 14.8
LIN54-206ENST00000506560 AGMOQ6ZNB7 445 aa12.82□□□□□ -0.36
LIN54-206ENST00000506560 TAB3Q8N5C8 712 aaPredicted RBP12.82□□□□□ -0.36
LIN54-206ENST00000506560 LRRC45Q96CN5 670 aa12.82□□□□□ -0.36
LIN54-206ENST00000506560 CASTOR2A6NHX0 329 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 LIASO43766 372 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 TAF6P49848 677 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 CLCNKBP51801 687 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 ITGA8P53708 1063 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 GSCP56915 257 aaPredicted RBP12.81□□□□□ -0.36
LIN54-206ENST00000506560 HTRA3P83110 453 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 SP3Q02447 781 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 TAP1Q03518 808 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 CCNG2Q16589 344 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 PTGISQ16647 500 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 LRRC38Q5VT99 294 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 CTU1Q7Z7A3 348 aaKnown RBP12.81□□□□□ -0.36
LIN54-206ENST00000506560 ADGRF2Q8IZF7 708 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 GOLGA6L1Q8N7Z2 621 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 IPO4Q8TEX9 1081 aaKnown RBP12.81□□□□□ -0.36
LIN54-206ENST00000506560 CAPNS2Q96L46 248 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 TMEM121Q9BTD3 319 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 DDX23Q9BUQ8 820 aaKnown RBP12.81□□□□□ -0.36
LIN54-206ENST00000506560 USP18Q9UMW8 372 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 F8W810 466 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 M0QZ92 97 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 CD4P01730 458 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 LCP1P13796 627 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 CCDC14Q49A88 953 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 TFDP3Q5H9I0 405 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 SMC1BQ8NDV3 1235 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 KLHDC9Q8NEP7 349 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 APPL2Q8NEU8 664 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 ATL2Q8NHH9 583 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 FNIP1Q8TF40 1166 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.81□□□□□ -0.36
LIN54-206ENST00000506560 SLCO2A1Q92959 643 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 EXOC4Q96A65 974 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 RBM41Q96IZ5 413 aaKnown RBP12.81□□□□□ -0.36
LIN54-206ENST00000506560 SPC25Q9HBM1 224 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 PADI3Q9ULW8 664 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 SMIM23A6NLE4 172 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 OPA1O60313 960 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 MAP3K6O95382 1288 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 KDELR1P24390 212 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 PMS2P54278 862 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 GDF10P55107 478 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 HNRNPH2P55795 449 aaKnown RBP12.81□□□□□ -0.36
LIN54-206ENST00000506560 PTK6Q13882 451 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 SLC29A2Q14542 456 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 CA9Q16790 459 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 NPNTQ6UXI9 565 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 FAM76AQ8TAV0 307 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 HASPINQ8TF76 798 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 SLC4A5Q9BY07 1137 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 NGRNQ9NPE2 291 aaKnown RBP12.81□□□□□ -0.36
LIN54-206ENST00000506560 WDR35Q9P2L0 1181 aa12.81□□□□□ -0.36
LIN54-206ENST00000506560 ARL5CA6NH57 179 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 CST8O60676 142 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 TRUB2O95900 331 aaKnown RBP12.8□□□□□ -0.36
LIN54-206ENST00000506560 PECAM1P16284 738 aaPredicted RBP12.8□□□□□ -0.36
LIN54-206ENST00000506560 GPD1P21695 349 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 ADCY8P40145 1251 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 ZNF143P52747 638 aaPredicted RBP12.8□□□□□ -0.36
LIN54-206ENST00000506560 ZC3H12AQ5D1E8 599 aaKnown RBP12.8□□□□□ -0.36
LIN54-206ENST00000506560 RHBDF2Q6PJF5 856 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 TSPYL2Q9H2G4 693 aaPredicted RBP12.8□□□□□ -0.36
LIN54-206ENST00000506560 SNX25Q9H3E2 840 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 TMBIM4Q9HC24 238 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 TMEM30AQ9NV96 361 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 GDAP2Q9NXN4 497 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 CALCOCO1Q9P1Z2 691 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 GOLGA8KD6RF30 607 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 CYB561D2O14569 222 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 POMCP01189 267 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 KLRC2P26717 231 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 MTM1Q13496 603 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 BYSLQ13895 437 aaKnown RBP12.8□□□□□ -0.36
LIN54-206ENST00000506560 ODF2Q5BJF6 829 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 SCYL2Q6P3W7 929 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 PAQR9Q6ZVX9 377 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 GSTA5Q7RTV2 222 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 TMEM110Q86TL2 294 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 ACTL9Q8TC94 416 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 CALN1Q9BXU9 219 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 BCCIPQ9P287 314 aaKnown RBP eCLIP12.8□□□□□ -0.36
LIN54-206ENST00000506560 HESX1Q9UBX0 185 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 ZNF148Q9UQR1 794 aa12.8□□□□□ -0.36
LIN54-206ENST00000506560 THSD7BQ9C0I4 1608 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 HPDP32754 393 aaPredicted RBP12.79□□□□□ -0.36
LIN54-206ENST00000506560 PITX1P78337 314 aaPredicted RBP12.79□□□□□ -0.36
LIN54-206ENST00000506560 OTUD4Q01804 1114 aaKnown RBP12.79□□□□□ -0.36
LIN54-206ENST00000506560 NOGQ13253 232 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 LIMS2Q7Z4I7 341 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 UNC93AQ86WB7 457 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 FUKQ8N0W3 1084 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 CRYBG2Q8N1P7 616 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms