RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 ARL14EPQ8N8R7 260 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-215ENST00000506161 B3GALNT2Q8NCR0 500 aa17.84■□□□□ 0.45
PDLIM7-215ENST00000506161 TMC2Q8TDI7 906 aa17.84■□□□□ 0.45
PDLIM7-215ENST00000506161 SYAP1Q96A49 352 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-215ENST00000506161 TWNKQ96RR1 684 aa17.84■□□□□ 0.45
PDLIM7-215ENST00000506161 KCNK16Q96T55 309 aa17.84■□□□□ 0.45
PDLIM7-215ENST00000506161 CHRDQ9H2X0 955 aa17.84■□□□□ 0.45
PDLIM7-215ENST00000506161 EBF3Q9H4W6 596 aa17.84■□□□□ 0.45
PDLIM7-215ENST00000506161 FBRSL1Q9HCM7 1045 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-215ENST00000506161 TRPC7Q9HCX4 862 aa17.84■□□□□ 0.45
PDLIM7-215ENST00000506161 R3HCC1Q9Y3T6 440 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-215ENST00000506161 ATP6V1DQ9Y5K8 247 aa17.84■□□□□ 0.45
PDLIM7-215ENST00000506161 ANTXRLA6NF34 631 aa17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 BEST1O76090 585 aa17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 HLA-DRAP01903 254 aa17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 ASPAP45381 313 aa17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 GCLMP48507 274 aa17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 CSTF1Q05048 431 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 USP4Q13107 963 aa17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 PON2Q15165 354 aa17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 ZNF77Q15935 545 aa17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 NFIL3Q16649 462 aa17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 ZNF667Q5HYK9 610 aa17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 VSTM1Q6UX27 236 aa17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 ZMIZ2Q8NF64 920 aa17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 CSGALNACT1Q8TDX6 532 aa17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 TAS1R2Q8TE23 839 aa17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 MRPS31Q92665 395 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 NELL1Q92832 810 aa17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 SPATA17Q96L03 361 aa17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 TTLL2Q9BWV7 592 aa17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 PRMT8Q9NR22 394 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 TDP1Q9NUW8 608 aa17.83■□□□□ 0.44
PDLIM7-215ENST00000506161 MAN2B1O00754 1011 aa17.82■□□□□ 0.44
PDLIM7-215ENST00000506161 LAMTOR5O43504 91 aa17.82■□□□□ 0.44
PDLIM7-215ENST00000506161 CALUO43852 315 aaPredicted RBP17.82■□□□□ 0.44
PDLIM7-215ENST00000506161 ASS1P00966 412 aaKnown RBP17.82■□□□□ 0.44
PDLIM7-215ENST00000506161 CCDC130P13994 396 aa17.82■□□□□ 0.44
PDLIM7-215ENST00000506161 PRCPP42785 496 aa17.82■□□□□ 0.44
PDLIM7-215ENST00000506161 PGFP49763 221 aa17.82■□□□□ 0.44
PDLIM7-215ENST00000506161 VAMP7P51809 220 aa17.82■□□□□ 0.44
PDLIM7-215ENST00000506161 KPNA1P52294 538 aaPredicted RBP17.82■□□□□ 0.44
PDLIM7-215ENST00000506161 SATB1Q01826 763 aa17.82■□□□□ 0.44
PDLIM7-215ENST00000506161 DMWDQ09019 674 aa17.82■□□□□ 0.44
PDLIM7-215ENST00000506161 ACOT1Q86TX2 421 aa17.82■□□□□ 0.44
PDLIM7-215ENST00000506161 FAM35AQ86V20 835 aa17.82■□□□□ 0.44
PDLIM7-215ENST00000506161 NELL2Q99435 816 aa17.82■□□□□ 0.44
PDLIM7-215ENST00000506161 RNF38Q9H0F5 515 aa17.82■□□□□ 0.44
PDLIM7-215ENST00000506161 MMRN2Q9H8L6 949 aa17.82■□□□□ 0.44
PDLIM7-215ENST00000506161 TRIM49BA6NDI0 452 aa17.81■□□□□ 0.44
PDLIM7-215ENST00000506161 SCAMP3O14828 347 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-215ENST00000506161 GADD45BO75293 160 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-215ENST00000506161 FAM163BP0C2L3 166 aa17.81■□□□□ 0.44
PDLIM7-215ENST00000506161 DDX6P26196 483 aaKnown RBP eCLIP17.81■□□□□ 0.44
PDLIM7-215ENST00000506161 AVPR1AP37288 418 aa17.81■□□□□ 0.44
PDLIM7-215ENST00000506161 IFRD2Q12894 506 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-215ENST00000506161 DENND5BQ6ZUT9 1274 aa17.81■□□□□ 0.44
PDLIM7-215ENST00000506161 FUKQ8N0W3 1084 aa17.81■□□□□ 0.44
PDLIM7-215ENST00000506161 SUMF1Q8NBK3 374 aa17.81■□□□□ 0.44
PDLIM7-215ENST00000506161 TTC16Q8NEE8 873 aa17.81■□□□□ 0.44
PDLIM7-215ENST00000506161 EZH1Q92800 747 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-215ENST00000506161 SEMA4DQ92854 862 aa17.81■□□□□ 0.44
PDLIM7-215ENST00000506161 C8orf48Q96LL4 319 aa17.81■□□□□ 0.44
PDLIM7-215ENST00000506161 POLR3BQ9NW08 1133 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-215ENST00000506161 MRPS17Q9Y2R5 130 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-215ENST00000506161 PCDHA5Q9Y5H7 936 aa17.81■□□□□ 0.44
PDLIM7-215ENST00000506161 WNT6Q9Y6F9 365 aa17.81■□□□□ 0.44
PDLIM7-215ENST00000506161 MAPK13O15264 365 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 SDHBP21912 280 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 PIK3CAP42336 1068 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 NDST1P52848 882 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 AP3M2P53677 418 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 MLLT6P55198 1093 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 MCCD1P59942 119 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 ADAM9Q13443 819 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 RUNX3Q13761 415 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 CCINQ13939 588 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 BECN1Q14457 450 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 ZNF268Q14587 947 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 MAPRE1Q15691 268 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 ISM2Q6H9L7 571 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 FSTL4Q6MZW2 842 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 FAM186BQ8IYM0 893 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 C12orf29Q8N999 325 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 SCAMP5Q8TAC9 235 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 SPATA20Q8TB22 786 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 WHAMMQ8TF30 809 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 SMOQ99835 787 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 LINC00597Q9H2U6 94 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 C8orf33Q9H7E9 229 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 UXTQ9UBK9 157 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 FBXO4Q9UKT5 387 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 CEP250Q9BV73 2442 aa17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 TPRP12270 2363 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-215ENST00000506161 ZFHX4Q86UP3 3567 aa17.79■□□□□ 0.44
PDLIM7-215ENST00000506161 ZNF840PA6NDX5 716 aa17.79■□□□□ 0.44
PDLIM7-215ENST00000506161 TNFRSF10BO14763 440 aa17.79■□□□□ 0.44
PDLIM7-215ENST00000506161 TRIM66O15016 1216 aa17.79■□□□□ 0.44
PDLIM7-215ENST00000506161 CD44P16070 742 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-215ENST00000506161 MAGEA9P43362 315 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms