RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 PSTKQ8IV42 348 aaKnown RBP11.88□□□□□ -0.51
NFKB1-205ENST00000505458 TMEM86AQ8N2M4 240 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 OR6B3Q8NGW1 331 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 HAUS1Q96CS2 278 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 EIF2AQ9BY44 585 aaKnown RBP11.88□□□□□ -0.51
NFKB1-205ENST00000505458 HMGXB4Q9UGU5 601 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 GGA2Q9UJY4 613 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 R3HDM2Q9Y2K5 976 aaKnown RBP11.88□□□□□ -0.51
NFKB1-205ENST00000505458 TRIP11Q15643 1979 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 DOCK3Q8IZD9 2030 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 MDM4O15151 490 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 TGM2P21980 687 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 SLC26A9Q7LBE3 791 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 JOSD2Q8TAC2 188 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 EPN3Q9H201 632 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 CDC42EP4Q9H3Q1 356 aaKnown RBP11.88□□□□□ -0.51
NFKB1-205ENST00000505458 ATXN2Q99700 1313 aaKnown RBP11.88□□□□□ -0.51
NFKB1-205ENST00000505458 TREHO43280 583 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 SKIP12755 728 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 PDGFRAP16234 1089 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 SLC29A2Q14542 456 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 UBXN11Q5T124 520 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 KCTD16Q68DU8 428 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 LRRC31Q6UY01 552 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 EPB41L4BQ9H329 900 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 NXF3Q9H4D5 531 aaKnown RBP11.88□□□□□ -0.51
NFKB1-205ENST00000505458 GTF2IRD1Q9UHL9 959 aa11.88□□□□□ -0.51
NFKB1-205ENST00000505458 C3orf70A6NLC5 250 aaPredicted RBP11.87□□□□□ -0.51
NFKB1-205ENST00000505458 CAND2O75155 1236 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 ENDOD1O94919 500 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 CYBAP13498 195 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 MIPP30301 263 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 GNL1P36915 607 aaPredicted RBP11.87□□□□□ -0.51
NFKB1-205ENST00000505458 EFHC1Q5JVL4 640 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 SLC35F5Q8WV83 523 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 TMEM51Q9NW97 253 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 TUBGCP4Q9UGJ1 667 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 NOVA2Q9UNW9 492 aaKnown RBP11.87□□□□□ -0.51
NFKB1-205ENST00000505458 IPPQ9Y573 584 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 ACTL7BQ9Y614 415 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.87□□□□□ -0.51
NFKB1-205ENST00000505458 GPR182O15218 404 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 RARBP10826 455 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 PRAMEF19Q5SWL8 479 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 KAZNQ674X7 775 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 SCARA3Q6AZY7 606 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 FAM183BPQ6ZVS7 135 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 RFX6Q8HWS3 928 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.87□□□□□ -0.51
NFKB1-205ENST00000505458 RSAD2Q8WXG1 361 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 RAPGEF5Q92565 580 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 ZMAT2Q96NC0 199 aaKnown RBP11.87□□□□□ -0.51
NFKB1-205ENST00000505458 ZNF670Q9BS34 389 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 UBN1Q9NPG3 1134 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 GIT1Q9Y2X7 761 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 SCN1AP35498 2009 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 GRIN2DO15399 1336 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 E5RJQ4 531 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 PI4K2BG5E9Z4 385 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 CABYRO75952 493 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 GJB6O95452 261 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 FGFR4P22455 802 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 LSP1P33241 339 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 RASA2Q15283 850 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 TWF2Q6IBS0 349 aaKnown RBP11.87□□□□□ -0.51
NFKB1-205ENST00000505458 OLFML1Q6UWY5 402 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 CENPUQ71F23 418 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 CCDC25Q86WR0 208 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 RXFP2Q8WXD0 754 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 P3H4Q92791 437 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 HERPUD2Q9BSE4 406 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 SEMA4AQ9H3S1 761 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 BCCIPQ9P287 314 aaKnown RBP eCLIP11.87□□□□□ -0.51
NFKB1-205ENST00000505458 RCOR3Q9P2K3 495 aaPredicted RBP11.87□□□□□ -0.51
NFKB1-205ENST00000505458 FETUBQ9UGM5 382 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 SLC12A6Q9UHW9 1150 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 DNPEPQ9ULA0 475 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 SQORQ9Y6N5 450 aa11.87□□□□□ -0.51
NFKB1-205ENST00000505458 A0A087WUV0 522 aaPredicted RBP11.86□□□□□ -0.51
NFKB1-205ENST00000505458 EBAG9O00559 213 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 CST5P28325 142 aaPredicted RBP11.86□□□□□ -0.51
NFKB1-205ENST00000505458 RPL9P32969 192 aaKnown RBP11.86□□□□□ -0.51
NFKB1-205ENST00000505458 ARSEP51690 589 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 PLCB3Q01970 1234 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 TMEM62Q0P6H9 643 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 CBLBQ13191 982 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 SOWAHAQ2M3V2 549 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 P3H1Q32P28 736 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 DNAJC21Q5F1R6 531 aaKnown RBP11.86□□□□□ -0.51
NFKB1-205ENST00000505458 SH2D3CQ8N5H7 860 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 MRPL45Q9BRJ2 306 aaKnown RBP11.86□□□□□ -0.51
NFKB1-205ENST00000505458 ZWILCHQ9H900 591 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 XPO1O14980 1071 aaKnown RBP11.86□□□□□ -0.51
NFKB1-205ENST00000505458 SEPT4O43236 478 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 CST8O60676 142 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 CDH16O75309 829 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 C6orf222P0C671 652 aaPredicted RBP11.86□□□□□ -0.51
NFKB1-205ENST00000505458 KRT81Q14533 505 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 CCL14Q16627 93 aa11.86□□□□□ -0.51
NFKB1-205ENST00000505458 PTGISQ16647 500 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms