RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 SLC39A12Q504Y0 691 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 MDH1BQ5I0G3 518 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 OTUD1Q5VV17 481 aaPredicted RBP8.78□□□□□ -1
CDC42SE2-208ENST00000505065 PPP1R2P3Q6NXS1 205 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 GPRIN1Q7Z2K8 1008 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 SNX25Q9H3E2 840 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 MAN1C1Q9NR34 630 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 TMEM51Q9NW97 253 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 ZMYM5Q9UJ78 669 aa8.78□□□□□ -1
CDC42SE2-208ENST00000505065 LOC730098B7Z3J9 87 aa8.77□□□□□ -1
CDC42SE2-208ENST00000505065 GLUD1P00367 558 aa8.77□□□□□ -1
CDC42SE2-208ENST00000505065 OAS1P00973 400 aaKnown RBP8.77□□□□□ -1
CDC42SE2-208ENST00000505065 SERPING1P05155 500 aa8.77□□□□□ -1
CDC42SE2-208ENST00000505065 MMP8P22894 467 aa8.77□□□□□ -1
CDC42SE2-208ENST00000505065 GTF2F1P35269 517 aaKnown RBP eCLIP8.77□□□□□ -16e-7■■■■■ 32.9
CDC42SE2-208ENST00000505065 TUFMP49411 452 aaKnown RBP8.77□□□□□ -1
CDC42SE2-208ENST00000505065 KIF11P52732 1056 aa8.77□□□□□ -1
CDC42SE2-208ENST00000505065 POLR2FP61218 127 aaKnown RBP8.77□□□□□ -1
CDC42SE2-208ENST00000505065 ACOT1Q86TX2 421 aa8.77□□□□□ -1
CDC42SE2-208ENST00000505065 ENTPD7Q9NQZ7 604 aa8.77□□□□□ -1
CDC42SE2-208ENST00000505065 NXF1Q9UBU9 619 aaKnown RBP8.77□□□□□ -1
CDC42SE2-208ENST00000505065 COG5Q9UP83 839 aa8.77□□□□□ -1
CDC42SE2-208ENST00000505065 A8MXQ7 604 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 FYNP06241 537 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 CCDC130P13994 396 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 MRE11P49959 708 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 TSPY1Q01534 308 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 PUS10Q3MIT2 529 aaKnown RBP8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 SGO2Q562F6 1265 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 OLFML1Q6UWY5 402 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 ZDHHC17Q8IUH5 632 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 PPM1KQ8N3J5 372 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 KREMEN2Q8NCW0 462 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 DMAP1Q9NPF5 467 aaPredicted RBP8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 TMEM59LQ9UK28 342 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 TSPAN16Q9UKR8 245 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 GRXCR2A6NFK2 248 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 DDX3XO00571 662 aaKnown RBP eCLIP8.77□□□□□ -1.019e-7■■■■□ 21.7
CDC42SE2-208ENST00000505065 CYP26A1O43174 497 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 SERPINC1P01008 464 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 RPL17P18621 184 aaKnown RBP8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 DLX2Q07687 328 aaPredicted RBP8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 SMAD4Q13485 552 aaKnown RBP8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 DENND1BQ6P3S1 775 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 SLC2A14Q8TDB8 520 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 CENPIQ92674 756 aaPredicted RBP8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 CYFIP2Q96F07 1278 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 ZNF334Q9HCZ1 680 aaPredicted RBP8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 WDR6Q9NNW5 1121 aaKnown RBP8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 INTUQ9ULD6 942 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 DPYSL4O14531 572 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 MED7O43513 233 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 GLI1P08151 1106 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 OR4Q2P0C623 313 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 DDX6P26196 483 aaKnown RBP eCLIP8.77□□□□□ -1.014e-6■■■■□ 24.4
CDC42SE2-208ENST00000505065 CASP14P31944 242 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 NNTQ13423 1086 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 BMS1Q14692 1282 aaKnown RBP8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 TMEM270Q6UE05 265 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 Q7L0L9 218 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 DEFB123Q8N688 67 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 SECISBP2LQ93073 1101 aaKnown RBP8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 AGPAT1Q99943 283 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 OBP2AQ9NY56 170 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 DNMT3BQ9UBC3 853 aaKnown RBP8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 GTF3C4Q9UKN8 822 aa8.77□□□□□ -1.01
CDC42SE2-208ENST00000505065 TCF20Q9UGU0 1960 aaKnown RBP8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 SLC38A8A6NNN8 435 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 ZNF263O14978 683 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 ACAT1P24752 427 aaKnown RBP8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 GNA15P30679 374 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 NRIP1P48552 1158 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 SMAD2Q15796 467 aaKnown RBP8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 SCARA5Q6ZMJ2 495 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 SCD5Q86SK9 330 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 SLC20A1Q8WUM9 679 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 MYLIPQ8WY64 445 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 FAM207AQ9NSI2 230 aaPredicted RBP8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 CLIC5Q9NZA1 410 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 PCDHB4Q9Y5E5 795 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 ZFP37Q9Y6Q3 630 aaPredicted RBP8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 USP46P62068 366 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 PSMC1P62191 440 aaKnown RBP8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 PTK2Q05397 1052 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 C1QBPQ07021 282 aaKnown RBP8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 TMC7Q7Z402 723 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 PALB2Q86YC2 1186 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 ZDHHC14Q8IZN3 488 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 ADAMTS19Q8TE59 1207 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 PJA2O43164 708 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 ADCY5O95622 1261 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 PNMA6AP0CW24 399 aaPredicted RBP8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 CDK11BP21127 795 aaKnown RBP8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 CYP2F1P24903 491 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 CCR2P41597 374 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 PDCLQ13371 301 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 SPOUT1Q5T280 376 aaKnown RBP8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 PMF1Q6P1K2 205 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 CNGA4Q8IV77 575 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms