RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 LIMCH1Q9UPQ0 1083 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 C2CD2Q9Y426 696 aa7.4□□□□□ -1.22
NPIPB3-203ENST00000504841 MYMKA6NI61 221 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 TAF4O00268 1085 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 LEFTY2O00292 366 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 TNFRSF10BO14763 440 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 OPHN1O60890 802 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 KAT7O95251 611 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 APODP05090 189 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 ITGB3P05106 788 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 KRT19P08727 400 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 PLCG1P19174 1290 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 RDXP35241 583 aaKnown RBP7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 PNPLA4P41247 253 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 WASP42768 502 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 SLC6A11P48066 632 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 WNT7BP56706 349 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 PSMC1P62191 440 aaKnown RBP7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 MRPS21P82921 87 aaKnown RBP7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 FOXK1P85037 733 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 ATP2C1P98194 919 aaPredicted RBP7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 RPL6Q02878 288 aaKnown RBP7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 GFPT1Q06210 699 aaPredicted RBP7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 MESP2Q0VG99 397 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 IFRD2Q12894 506 aaPredicted RBP7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 RESTQ13127 1097 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 SEMA3BQ13214 749 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 GAB4Q2WGN9 574 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 TMEM119Q4V9L6 283 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 EOGTQ5NDL2 527 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 EMC10Q5UCC4 262 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 PDZD3Q86UT5 571 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 OSTM1Q86WC4 334 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 C12orf40Q86WS4 652 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 PROSER1Q86XN7 944 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 MINDY1Q8N5J2 469 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 PNPLA1Q8N8W4 532 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 IL17RCQ8NAC3 791 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 OLIG1Q8TAK6 271 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 SPATA18Q8TC71 538 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 LEO1Q8WVC0 666 aaPredicted RBP7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 POMGNT1Q8WZA1 660 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 TRMT2BQ96GJ1 504 aaKnown RBP7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 CAMK1GQ96NX5 476 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 CCSER1Q9C0I3 900 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 ABCB6Q9NP58 842 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 POLMQ9NP87 494 aaPredicted RBP7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 ARHGEF4Q9NR80 690 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 ARHGAP26Q9UNA1 814 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 AGAP1Q9UPQ3 857 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 SNX9Q9Y5X1 595 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 CACNA1EQ15878 2313 aa7.39□□□□□ -1.23
NPIPB3-203ENST00000504841 ZFYVE26Q68DK2 2539 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 ATP2C2O75185 946 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 ZIC2O95409 532 aaPredicted RBP7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 ADH5P11766 374 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 GRIK1P39086 918 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 ZXDBP98169 803 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 CYP27A1Q02318 531 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 SCAPQ12770 1279 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 MCM6Q14566 821 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 DHCR24Q15392 516 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 DUOXA1Q1HG43 343 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 COL28A1Q2UY09 1125 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 MAP7D1Q3KQU3 841 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 SCARA3Q6AZY7 606 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 SLFN12LQ6IEE8 588 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 SLC23A3Q6PIS1 610 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 PIP4P1Q86T03 277 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 LRRC15Q8TF66 581 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 MYLPFQ96A32 169 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 SAAL1Q96ER3 474 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 CALML4Q96GE6 196 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 MYRFLQ96LU7 910 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 PNKPQ96T60 521 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 PKMYT1Q99640 499 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 SYT15Q9BQS2 421 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 ACBD6Q9BR61 282 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 FAM213AQ9BRX8 229 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 TRPM5Q9NZQ8 1165 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 CFAP97Q9P2B7 532 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 PILRBQ9UKJ0 227 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 SLC6A14Q9UN76 642 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 CPQQ9Y646 472 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 PTPRDP23468 1912 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 HELZP42694 1942 aaKnown RBP7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 ADAMTS9Q9P2N4 1935 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 CEP295Q9C0D2 2601 aa7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 TNRC6BQ9UPQ9 1833 aaKnown RBP7.38□□□□□ -1.23
NPIPB3-203ENST00000504841 ANAPC1Q9H1A4 1944 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 GOLGA8IPA6NC78 632 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 GOLGA8JA6NMD2 632 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 H0Y626 953 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 AP5Z1O43299 807 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 SH3BP5O60239 455 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 ADAM23O75077 832 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 IL18RAPO95256 599 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 TRIM16O95361 564 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 ADH1CP00326 375 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 SERPINF2P08697 491 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms