RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 ADCY8P40145 1251 aa7.4□□□□□ -1.23
SNX25-202ENST00000504273 GDF10P55107 478 aa7.4□□□□□ -1.23
SNX25-202ENST00000504273 TRPC3Q13507 836 aa7.4□□□□□ -1.23
SNX25-202ENST00000504273 TFDP1Q14186 410 aa7.4□□□□□ -1.23
SNX25-202ENST00000504273 FASTKD3Q14CZ7 662 aaKnown RBP7.4□□□□□ -1.23
SNX25-202ENST00000504273 ODF2Q5BJF6 829 aa7.4□□□□□ -1.23
SNX25-202ENST00000504273 EXOC8Q8IYI6 725 aa7.4□□□□□ -1.23
SNX25-202ENST00000504273 PPTC7Q8NI37 304 aa7.4□□□□□ -1.23
SNX25-202ENST00000504273 MCRS1Q96EZ8 462 aa7.4□□□□□ -1.23
SNX25-202ENST00000504273 CCDC114Q96M63 670 aa7.4□□□□□ -1.23
SNX25-202ENST00000504273 OSBPL7Q9BZF2 842 aa7.4□□□□□ -1.23
SNX25-202ENST00000504273 ROPN1BQ9BZX4 212 aaPredicted RBP7.4□□□□□ -1.23
SNX25-202ENST00000504273 CCDC134Q9H6E4 229 aa7.4□□□□□ -1.23
SNX25-202ENST00000504273 RPF1Q9H9Y2 349 aaKnown RBP7.4□□□□□ -1.23
SNX25-202ENST00000504273 ROPN1Q9HAT0 212 aaPredicted RBP7.4□□□□□ -1.23
SNX25-202ENST00000504273 CDHR5Q9HBB8 845 aa7.4□□□□□ -1.23
SNX25-202ENST00000504273 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.4□□□□□ -1.23
SNX25-202ENST00000504273 DRG1Q9Y295 367 aaKnown RBP7.4□□□□□ -1.23
SNX25-202ENST00000504273 ZNF236Q9UL36 1845 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 CENPFP49454 3210 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 BTBD19C9JJ37 291 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 PPEF2O14830 753 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 RGS16O15492 202 aaPredicted RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 TNNC2P02585 160 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 ATF2P15336 505 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 SMPD1P17405 629 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 ARSEP51690 589 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 CALCOCO2Q13137 446 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 LAMC2Q13753 1193 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 P3H1Q32P28 736 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 WDR78Q5VTH9 848 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 C17orf99Q6UX52 265 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 GRK7Q8WTQ7 553 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 KHSRPQ92945 711 aaKnown RBP eCLIP7.39□□□□□ -1.232e-7■■■■□ 26
SNX25-202ENST00000504273 NKD2Q969F2 451 aaPredicted RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 ANKRD36BP1Q96IX9 119 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 SEC16BQ96JE7 1060 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 ZMAT2Q96NC0 199 aaKnown RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 SCLT1Q96NL6 688 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 PLVAPQ9BX97 442 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 FAM107BQ9H098 131 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 EPHX3Q9H6B9 360 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 PRMT7Q9NVM4 692 aaPredicted RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 CCL15-CCL14A0A0B4J2E2 113 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 ASB14A6NK59 587 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 GOLGA8SH3BPF8 625 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 PDHXO00330 501 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 DNALI1O14645 258 aaPredicted RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 KRT19P08727 400 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 HOXA11P31270 313 aaPredicted RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 SSR1P43307 286 aaKnown RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 YWHAEP62258 255 aaKnown RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 PIGHQ14442 188 aaPredicted RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 CCL15Q16663 113 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 SMTNL2Q2TAL5 461 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 KCNT1Q5JUK3 1230 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 RNASEH2BQ5TBB1 312 aaKnown RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 PPP1R2P3Q6NXS1 205 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 YTHDF3Q7Z739 585 aaKnown RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 PIGWQ7Z7B1 504 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 ZCCHC9Q8N567 271 aaKnown RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 BRI3BPQ8WY22 251 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 HAUS1Q96CS2 278 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 C9orf72Q96LT7 481 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 SERPINB12Q96P63 405 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 DEFB118Q96PH6 123 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 ADAMTS10Q9H324 1103 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 CNOT10Q9H9A5 744 aaKnown RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 HOMER3Q9NSC5 361 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 LGALS13Q9UHV8 139 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 FARP1Q9Y4F1 1045 aaPredicted RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 A0A087WUV0 522 aaPredicted RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 A0A1B0GUA9 196 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 DNM1LO00429 736 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 BANF1O75531 89 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 ENDOD1O94919 500 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 KDELR1P24390 212 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 LIG3P49916 1009 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 NRLP54845 237 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 VCPP55072 806 aaKnown RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 COPS2P61201 443 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 PTPN11Q06124 597 aaPredicted RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 INCA1Q0VD86 236 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 SNAPC2Q13487 334 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 TFDP3Q5H9I0 405 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 ZNF667Q5HYK9 610 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 SMYD5Q6GMV2 418 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 LRRC34Q8IZ02 419 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 MICALL1Q8N3F8 863 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 GPRC5AQ8NFJ5 357 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 UBA3Q8TBC4 463 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 MAML1Q92585 1016 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 TMEM176AQ96HP8 235 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 RBM41Q96IZ5 413 aaKnown RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 PRMT1Q99873 361 aaKnown RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 LPIN3Q9BQK8 851 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 TMEM121Q9BTD3 319 aa7.39□□□□□ -1.23
SNX25-202ENST00000504273 METTL5Q9NRN9 209 aaKnown RBP7.39□□□□□ -1.23
SNX25-202ENST00000504273 COL1A2P08123 1366 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms