RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 CMASQ8NFW8 434 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-204ENST00000501271 RSAD2Q8WXG1 361 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 THOC1Q96FV9 657 aaKnown RBP10.33□□□□□ -0.76
CLIP1-204ENST00000501271 PIWIL1Q96J94 861 aaKnown RBP10.33□□□□□ -0.76
CLIP1-204ENST00000501271 FRMD8P1Q9BZ68 369 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-204ENST00000501271 PDZD7Q9H5P4 517 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 PRMT7Q9NVM4 692 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-204ENST00000501271 SENP1Q9P0U3 644 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 KLHL14Q9P2G3 628 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 USP18Q9UMW8 372 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 SMG5Q9UPR3 1016 aaKnown RBP10.33□□□□□ -0.76
CLIP1-204ENST00000501271 A0A087WZ62 844 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 APOC4-APOC2K7ER74 178 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 IGF2BP3O00425 579 aaKnown RBP eCLIP10.33□□□□□ -0.76
CLIP1-204ENST00000501271 TRUB2O95900 331 aaKnown RBP10.33□□□□□ -0.76
CLIP1-204ENST00000501271 APOC2P02655 101 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 FGFR1P11362 822 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 CYP3A5P20815 502 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 CA4P22748 312 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 GABRB2P47870 512 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 ARL4CP56559 192 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 EIF3EP60228 445 aaKnown RBP10.33□□□□□ -0.76
CLIP1-204ENST00000501271 MMRN1Q13201 1228 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 ACVR2BQ13705 512 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 SPARCL1Q14515 664 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 RASA2Q15283 850 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 FAM102AQ5T9C2 384 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-204ENST00000501271 WDR78Q5VTH9 848 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 MAP1SQ66K74 1059 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-204ENST00000501271 NPNTQ6UXI9 565 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 CYP4V2Q6ZWL3 525 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-204ENST00000501271 DPH6Q7L8W6 267 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 PNMA8AQ86V59 439 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-204ENST00000501271 KIF2BQ8N4N8 673 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 FBXO36Q8NEA4 188 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 UBA3Q8TBC4 463 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 PYROXD1Q8WU10 500 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 GRAMD1AQ96CP6 724 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 PLCD4Q9BRC7 762 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 FDXACB1Q9BRP7 624 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-204ENST00000501271 CALN1Q9BXU9 219 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 NFKBIZQ9BYH8 718 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 NOD2Q9HC29 1040 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 ZMYND8Q9ULU4 1186 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-204ENST00000501271 PHTF1Q9UMS5 762 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 TRIM33Q9UPN9 1127 aa10.33□□□□□ -0.76
CLIP1-204ENST00000501271 SCN1AP35498 2009 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 E7ESA3 106 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 DDNO94850 711 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-204ENST00000501271 INSRRP14616 1297 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 PHKA2P46019 1235 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 PDK4Q16654 411 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 SLC10A6Q3KNW5 377 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 SMYD5Q6GMV2 418 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 RGS9BPQ6ZS82 235 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 ATP11CQ8NB49 1132 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 FBF1Q8TES7 1133 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 PAFAH2Q99487 392 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 ADPGKQ9BRR6 497 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 PHACTR1Q9C0D0 580 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 PPCSQ9HAB8 311 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 ERAP1Q9NZ08 941 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 BAIAP2L1Q9UHR4 511 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 STARD13Q9Y3M8 1113 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 RNF8O76064 485 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 RBP3P10745 1247 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 MCF2P10911 925 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 ARF4P18085 180 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-204ENST00000501271 KRT4P19013 534 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 RDXP35241 583 aaKnown RBP10.32□□□□□ -0.76
CLIP1-204ENST00000501271 IREB2P48200 963 aaKnown RBP10.32□□□□□ -0.76
CLIP1-204ENST00000501271 BASP1P80723 227 aaKnown RBP10.32□□□□□ -0.76
CLIP1-204ENST00000501271 MOGSQ13724 837 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 FAM187BQ17R55 369 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 C15orf59Q2T9L4 293 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-204ENST00000501271 BBS9Q3SYG4 887 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 PREPLQ4J6C6 727 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-204ENST00000501271 C3orf62Q6ZUJ4 267 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 ILDR2Q71H61 639 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 ASRGL1Q7L266 308 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 CEP57Q86XR8 500 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 ERO1BQ86YB8 467 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 SULF1Q8IWU6 871 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 SPATA18Q8TC71 538 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 MAGEC3Q8TD91 643 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 MZB1Q8WU39 189 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 HPDLQ96IR7 371 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 FAXDC2Q96IV6 333 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 HEXIM2Q96MH2 286 aaKnown RBP10.32□□□□□ -0.76
CLIP1-204ENST00000501271 DHRS4Q9BTZ2 278 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 ACSS3Q9H6R3 686 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 VRTNQ9H8Y1 702 aa10.32□□□□□ -0.76
CLIP1-204ENST00000501271 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.32□□□□□ -0.76
CLIP1-204ENST00000501271 XPO7Q9UIA9 1087 aaKnown RBP10.32□□□□□ -0.76
CLIP1-204ENST00000501271 MCF2LO15068 1137 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 EDF1O60869 148 aaKnown RBP10.31□□□□□ -0.76
CLIP1-204ENST00000501271 VTNP04004 478 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 HMGCRP04035 888 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 KRT16P08779 473 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 VDRP11473 427 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms