RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 MORC3Q14149 939 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 SUZ12Q15022 739 aaKnown RBP5.72□□□□□ -1.49
FXN-205ENST00000498653 TEAD4Q15561 434 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 PSMD5Q16401 504 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 STXBP5Q5T5C0 1151 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 TMEM164Q5U3C3 297 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 APOA5Q6Q788 366 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 IL27RAQ6UWB1 636 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 SLC36A4Q6YBV0 504 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 SV2AQ7L0J3 742 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 RTL10Q7L3V2 364 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 RGL4Q8IZJ4 473 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 ZNF654Q8IZM8 581 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 STAG2Q8N3U4 1231 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 ZCCHC9Q8N567 271 aaKnown RBP5.72□□□□□ -1.49
FXN-205ENST00000498653 SHKBP1Q8TBC3 707 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 URGCPQ8TCY9 931 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 HMGB4Q8WW32 186 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 SCG3Q8WXD2 468 aaKnown RBP5.72□□□□□ -1.49
FXN-205ENST00000498653 ZNF419Q96HQ0 510 aaPredicted RBP5.72□□□□□ -1.49
FXN-205ENST00000498653 PRIMPOLQ96LW4 560 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 P2RY13Q9BPV8 354 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 SLKQ9H2G2 1235 aaPredicted RBP5.72□□□□□ -1.49
FXN-205ENST00000498653 POLR1BQ9H9Y6 1135 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 CASS4Q9NQ75 786 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 DACT1Q9NYF0 836 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 ZDHHC3Q9NYG2 299 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 BRPF3Q9ULD4 1205 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 TPCN1Q9ULQ1 816 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 TBX20Q9UMR3 447 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 PHTF1Q9UMS5 762 aa5.72□□□□□ -1.49
FXN-205ENST00000498653 OBSL1O75147 1896 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 CCDC196A0A1B0GTZ2 297 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 SLC35F4A4IF30 521 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 ZBTB42B2RXF5 422 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 K7ELQ4 463 aaPredicted RBP5.71□□□□□ -1.5
FXN-205ENST00000498653 PAPSS1O43252 624 aaPredicted RBP5.71□□□□□ -1.5
FXN-205ENST00000498653 FIBPO43427 364 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 DHX16O60231 1041 aaKnown RBP5.71□□□□□ -1.5
FXN-205ENST00000498653 PFKFB2O60825 505 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 VPS4BO75351 444 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 F11P03951 625 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 PARP1P09874 1014 aaKnown RBP5.71□□□□□ -1.5
FXN-205ENST00000498653 EIF4BP23588 611 aaKnown RBP5.71□□□□□ -1.5
FXN-205ENST00000498653 KIF5BP33176 963 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 SREBF1P36956 1147 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 RBMXP38159 391 aaKnown RBP5.71□□□□□ -1.5
FXN-205ENST00000498653 GNAQP50148 359 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 CYP4F2P78329 520 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 LTBQ06643 244 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 ST3GAL1Q11201 340 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 PSMD2Q13200 908 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 RUNX3Q13761 415 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 BYSLQ13895 437 aaKnown RBP5.71□□□□□ -1.5
FXN-205ENST00000498653 RTN1Q16799 776 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 SKOR2Q2VWA4 1001 aaPredicted RBP5.71□□□□□ -1.5
FXN-205ENST00000498653 ASPRV1Q53RT3 343 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 SGO2Q562F6 1265 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 TRIM68Q6AZZ1 485 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 CPLX2Q6PUV4 134 aaKnown RBP5.71□□□□□ -1.5
FXN-205ENST00000498653 MICU3Q86XE3 530 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 XYLT1Q86Y38 959 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 MCF2L2Q86YR7 1114 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 RAB11FIP4Q86YS3 637 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 CCDC33Q8N5R6 958 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 FANCBQ8NB91 859 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 CTCFLQ8NI51 663 aaPredicted RBP5.71□□□□□ -1.5
FXN-205ENST00000498653 SEPT1Q8WYJ6 367 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 TMX3Q96JJ7 454 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 CNDP2Q96KP4 475 aaKnown RBP5.71□□□□□ -1.5
FXN-205ENST00000498653 FAM193BQ96PV7 902 aaPredicted RBP5.71□□□□□ -1.5
FXN-205ENST00000498653 MAP3K14Q99558 947 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 SENP7Q9BQF6 1050 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 FAM83CQ9BQN1 747 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 FAM105AQ9NUU6 356 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 RBM28Q9NW13 759 aaKnown RBP5.71□□□□□ -1.5
FXN-205ENST00000498653 OBP2AQ9NY56 170 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 BCCIPQ9P287 314 aaKnown RBP eCLIP5.71□□□□□ -1.5
FXN-205ENST00000498653 TUBD1Q9UJT1 453 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 VPS4AQ9UN37 437 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 ZNF281Q9Y2X9 895 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 ARID1BQ8NFD5 2236 aaPredicted RBP5.71□□□□□ -1.5
FXN-205ENST00000498653 SVEP1Q4LDE5 3571 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 PKDREJQ9NTG1 2253 aa5.71□□□□□ -1.5
FXN-205ENST00000498653 A0A1B0GVT2 93 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 CDRT15L2A8MXV6 281 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 SGK1O00141 431 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 MEIS1O00470 390 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 CPLX1O14810 134 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 ZNF623O75123 536 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 CDKL5O76039 1030 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 LARGE1O95461 756 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 C22orf31O95567 290 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 MT-CO3P00414 261 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 HSP90AA1P07900 732 aaKnown RBP5.7□□□□□ -1.5
FXN-205ENST00000498653 SNHG28P0DPA3 235 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 PDHBP11177 359 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 CD1EP15812 388 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 KCNA2P16389 499 aa5.7□□□□□ -1.5
FXN-205ENST00000498653 WT1P19544 449 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms