RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 KRT9P35527 623 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 LTBRP36941 435 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 FXR1P51114 621 aaKnown RBP eCLIP6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 RTP1P59025 263 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 SNAP25P60880 206 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 APBA1Q02410 837 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 SCRN1Q12765 414 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 KCNAB2Q13303 367 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 POLD3Q15054 466 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 ANO4Q32M45 955 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 UAP1L1Q3KQV9 507 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 GJC2Q5T442 439 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 E4F1Q66K89 784 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 KCNV1Q6PIU1 500 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 C16orf59Q7L2K0 433 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 THAP5Q7Z6K1 395 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 FBXO16Q8IX29 292 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 FAM126BQ8IXS8 530 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 SRBD1Q8N5C6 995 aaKnown RBP6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 FANCBQ8NB91 859 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 BCL7CQ8WUZ0 217 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 TRAPPC12Q8WVT3 735 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 ZSCAN31Q96LW9 406 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 PIGSQ96S52 555 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 SENP6Q9GZR1 1112 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 ARHGAP28Q9P2N2 729 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 ZHX1Q9UKY1 873 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 MAGED2Q9UNF1 606 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 PCDHA1Q9Y5I3 950 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 ST14Q9Y5Y6 855 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 GRIN2DO15399 1336 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 CCDC69A6NI79 296 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 NDUFS2O75306 463 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 ARIH2O95376 493 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 PLEKHA8P1O95397 391 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 CSTBP04080 98 aaKnown RBP6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 PTMAP06454 111 aaKnown RBP6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 ASGR1P07306 291 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 DHRS4L1P0CG22 281 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 C5AR1P21730 350 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 PSMA5P28066 241 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 HTR1BP28222 390 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 CPT1AP50416 773 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 CASP5P51878 434 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 MAPK10P53779 464 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 SMAD3P84022 425 aaKnown RBP6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 POU4F1Q01851 419 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 TNK2Q07912 1038 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 PGM5Q15124 567 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 CNN3Q15417 329 aaKnown RBP6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 TAF11Q15544 211 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 SMAD2Q15796 467 aaKnown RBP6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 STXBP2Q15833 593 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 KCNA10Q16322 511 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 FSCN1Q16658 493 aaKnown RBP6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 PGS1Q32NB8 556 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 USH1GQ495M9 461 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 FAM209BQ5JX69 171 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 NPNTQ6UXI9 565 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 RFX8Q6ZV50 586 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 CHST3Q7LGC8 479 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 TBC1D1Q86TI0 1168 aaPredicted RBP6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 CISD2Q8N5K1 135 aaKnown RBP6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 CRYGNQ8WXF5 182 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 TBC1D5Q92609 795 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 DPF3Q92784 378 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 PHKBQ93100 1093 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 KIAA1191Q96A73 305 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 RRP36Q96EU6 259 aaKnown RBP6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 TMEM41AQ96HV5 264 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 ZC3H10Q96K80 434 aaKnown RBP6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 Q96M66 194 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 GLT1D1Q96MS3 346 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 TAAR1Q96RJ0 339 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 RMDN3Q96TC7 470 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 NUDT16L1Q9BRJ7 211 aaKnown RBP6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 WDR11Q9BZH6 1224 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 GLT8D2Q9H1C3 349 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 PDGFCQ9NRA1 345 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 GPATCH2Q9NW75 528 aa6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 ISY1Q9ULR0 285 aaKnown RBP6.49□□□□□ -1.37
TMEM39A-212ENST00000497993 CDH23Q9H251 3354 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 CCDC196A0A1B0GTZ2 297 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 FAM47E-STBD1D6RA91 191 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 GCOM1H8Y6P7 765 aaPredicted RBP6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 HAS3O00219 553 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 ZBTB43O43298 467 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 THBDP07204 575 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 CLTBP09497 229 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 POLR2MP0CAP2 368 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 IFNAR1P17181 557 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 CALML3P27482 149 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 IL12RB1P42701 662 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 MAGEA10P43363 369 aaPredicted RBP6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 AGFG1P52594 562 aaKnown RBP6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 SLC16A1P53985 500 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 CLNS1AP54105 237 aaKnown RBP6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 NAP1L1P55209 391 aaKnown RBP6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 ARL4CP56559 192 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 ARHGAP1Q07960 439 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms