RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 KIF9Q9HAQ2 790 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 TRPC7Q9HCX4 862 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 TDP1Q9NUW8 608 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 WDFY4Q6ZS81 3184 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 CACNA1IQ9P0X4 2223 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 TRAV19A0A0A6YYK7 116 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 BICDL2A1A5D9 508 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 PPP1R3GB7ZBB8 358 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 ARNTLO00327 626 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 TADA3O75528 432 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 LETM1O95202 739 aaPredicted RBP16.3■□□□□ 0.2
NUP50-219ENST00000497960 MLLT6P55198 1093 aaPredicted RBP16.3■□□□□ 0.2
NUP50-219ENST00000497960 FKBP3Q00688 224 aaKnown RBP16.3■□□□□ 0.2
NUP50-219ENST00000497960 LRRC63Q05C16 580 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 PPP3CAQ08209 521 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 KRT39Q6A163 491 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 SPOPLQ6IQ16 392 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 CC2D1AQ6P1N0 951 aaPredicted RBP16.3■□□□□ 0.2
NUP50-219ENST00000497960 UNC93AQ86WB7 457 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 C1orf210Q8IVY1 113 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 MLKLQ8NB16 471 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 USP13Q92995 863 aaPredicted RBP16.3■□□□□ 0.2
NUP50-219ENST00000497960 EEF2KMTQ96G04 330 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 ZFYVE19Q96K21 471 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 MED10Q9BTT4 135 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 B3GNT5Q9BYG0 378 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 SDCBP2Q9H190 292 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 TMEM8AQ9HCN3 771 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 ANO10Q9NW15 660 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 SPATA6Q9NWH7 488 aaPredicted RBP16.3■□□□□ 0.2
NUP50-219ENST00000497960 TRPM5Q9NZQ8 1165 aa16.3■□□□□ 0.2
NUP50-219ENST00000497960 NDRG2Q9UN36 371 aaKnown RBP16.3■□□□□ 0.2
NUP50-219ENST00000497960 PTPRZ1P23471 2315 aaPredicted RBP16.29■□□□□ 0.2
NUP50-219ENST00000497960 CLDN5O00501 218 aa16.29■□□□□ 0.2
NUP50-219ENST00000497960 CKMP06732 381 aa16.29■□□□□ 0.2
NUP50-219ENST00000497960 USP17L7P0C7H9 530 aa16.29■□□□□ 0.2
NUP50-219ENST00000497960 PDE6CP51160 858 aa16.29■□□□□ 0.2
NUP50-219ENST00000497960 NDST1P52848 882 aa16.29■□□□□ 0.2
NUP50-219ENST00000497960 PMS1P54277 932 aaKnown RBP16.29■□□□□ 0.2
NUP50-219ENST00000497960 STX17P56962 302 aa16.29■□□□□ 0.2
NUP50-219ENST00000497960 NOP14P78316 857 aaKnown RBP16.29■□□□□ 0.2
NUP50-219ENST00000497960 ZNF268Q14587 947 aaPredicted RBP16.29■□□□□ 0.2
NUP50-219ENST00000497960 ACOT1Q86TX2 421 aa16.29■□□□□ 0.2
NUP50-219ENST00000497960 TAS1R2Q8TE23 839 aa16.29■□□□□ 0.2
NUP50-219ENST00000497960 CLDN23Q96B33 292 aa16.29■□□□□ 0.2
NUP50-219ENST00000497960 DNAI2Q9GZS0 605 aa16.29■□□□□ 0.2
NUP50-219ENST00000497960 CYP3A43Q9HB55 503 aa16.29■□□□□ 0.2
NUP50-219ENST00000497960 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.29■□□□□ 0.2
NUP50-219ENST00000497960 NUP210Q8TEM1 1887 aaPredicted RBP16.29■□□□□ 0.2
NUP50-219ENST00000497960 MIA3Q5JRA6 1907 aa16.28■□□□□ 0.2
NUP50-219ENST00000497960 SYCE3A1L190 88 aa16.28■□□□□ 0.2
NUP50-219ENST00000497960 SLC16A3O15427 465 aaKnown RBP16.28■□□□□ 0.2
NUP50-219ENST00000497960 NBL1P41271 181 aa16.28■□□□□ 0.2
NUP50-219ENST00000497960 ASPAP45381 313 aa16.28■□□□□ 0.2
NUP50-219ENST00000497960 RPS9P46781 194 aaKnown RBP16.28■□□□□ 0.2
NUP50-219ENST00000497960 PPP3CCP48454 512 aa16.28■□□□□ 0.2
NUP50-219ENST00000497960 MXI1P50539 228 aa16.28■□□□□ 0.2
NUP50-219ENST00000497960 TYRO3Q06418 890 aa16.28■□□□□ 0.2
NUP50-219ENST00000497960 ANKRD40Q6AI12 368 aa16.28■□□□□ 0.2
NUP50-219ENST00000497960 FAM35AQ86V20 835 aa16.28■□□□□ 0.2
NUP50-219ENST00000497960 SMARCD1Q96GM5 515 aa16.28■□□□□ 0.2
NUP50-219ENST00000497960 SLITRK1Q96PX8 696 aa16.28■□□□□ 0.2
NUP50-219ENST00000497960 TTLL2Q9BWV7 592 aa16.28■□□□□ 0.2
NUP50-219ENST00000497960 NIF3L1Q9GZT8 377 aa16.28■□□□□ 0.2
NUP50-219ENST00000497960 GKN1Q9NS71 199 aa16.28■□□□□ 0.2
NUP50-219ENST00000497960 GTSE1Q9NYZ3 720 aa16.28■□□□□ 0.2
NUP50-219ENST00000497960 CCL26Q9Y258 94 aa16.28■□□□□ 0.2
NUP50-219ENST00000497960 ZNF638Q14966 1978 aaKnown RBP16.27■□□□□ 0.2
NUP50-219ENST00000497960 SHISA7A6NL88 538 aa16.27■□□□□ 0.2
NUP50-219ENST00000497960 LAMTOR5O43504 91 aa16.27■□□□□ 0.2
NUP50-219ENST00000497960 RTN3O95197 1032 aaPredicted RBP16.27■□□□□ 0.2
NUP50-219ENST00000497960 PFKLP17858 780 aa16.27■□□□□ 0.2
NUP50-219ENST00000497960 HDCP19113 662 aa16.27■□□□□ 0.2
NUP50-219ENST00000497960 CACNA2D1P54289 1103 aa16.27■□□□□ 0.2
NUP50-219ENST00000497960 MCCD1P59942 119 aaPredicted RBP16.27■□□□□ 0.2
NUP50-219ENST00000497960 USP46P62068 366 aa16.27■□□□□ 0.2
NUP50-219ENST00000497960 IFRD2Q12894 506 aaPredicted RBP16.27■□□□□ 0.2
NUP50-219ENST00000497960 ITPRIPL2Q3MIP1 535 aa16.27■□□□□ 0.2
NUP50-219ENST00000497960 DCAF17Q5H9S7 520 aaPredicted RBP16.27■□□□□ 0.2
NUP50-219ENST00000497960 TCERG1LQ5VWI1 586 aa16.27■□□□□ 0.2
NUP50-219ENST00000497960 RALGPS2Q86X27 583 aaPredicted RBP16.27■□□□□ 0.2
NUP50-219ENST00000497960 NUP93Q8N1F7 819 aa16.27■□□□□ 0.2
NUP50-219ENST00000497960 CRYBG2Q8N1P7 616 aa16.27■□□□□ 0.2
NUP50-219ENST00000497960 ARL14EPQ8N8R7 260 aaPredicted RBP16.27■□□□□ 0.2
NUP50-219ENST00000497960 FBXL13Q8NEE6 735 aa16.27■□□□□ 0.2
NUP50-219ENST00000497960 TTC8Q8TAM2 541 aa16.27■□□□□ 0.2
NUP50-219ENST00000497960 CYP2S1Q96SQ9 504 aa16.27■□□□□ 0.2
NUP50-219ENST00000497960 APOBEC3GQ9HC16 384 aaKnown RBP16.27■□□□□ 0.2
NUP50-219ENST00000497960 DMAP1Q9NPF5 467 aaPredicted RBP16.27■□□□□ 0.2
NUP50-219ENST00000497960 RWDD2AQ9UIY3 292 aa16.27■□□□□ 0.2
NUP50-219ENST00000497960 DENND4CQ5VZ89 1909 aa16.27■□□□□ 0.19
NUP50-219ENST00000497960 COL4A3Q01955 1670 aa16.27■□□□□ 0.19
NUP50-219ENST00000497960 RIF1Q5UIP0 2472 aaKnown RBP16.26■□□□□ 0.19
NUP50-219ENST00000497960 PTPRDP23468 1912 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 TICRRQ7Z2Z1 1910 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 C2orf78A6NCI8 922 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 ZNF840PA6NDX5 716 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 PROB1E7EW31 1015 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 SPECC1L-ADORA2AF8WAN1 911 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 AP1G2O75843 785 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms