RNA–Protein interactions for RNA: ENST00000497791.5

UMPS-209, Transcript of uridine monophosphate synthetase, human

TSL 1 (best)

Gene UMPS, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UMPS-209	ENST00000497791	USP46	P62068	366 aa		15.71	■□□□□ 0.11
UMPS-209	ENST00000497791	CDR2	Q01850	454 aa		15.71	■□□□□ 0.11
UMPS-209	ENST00000497791	KLHL30	Q0D2K2	578 aa		15.71	■□□□□ 0.11
UMPS-209	ENST00000497791	COL19A1	Q14993	1142 aa		15.71	■□□□□ 0.11
UMPS-209	ENST00000497791	PMF1	Q6P1K2	205 aa		15.71	■□□□□ 0.11
UMPS-209	ENST00000497791	VSTM1	Q6UX27	236 aa		15.71	■□□□□ 0.11
UMPS-209	ENST00000497791	CNGA4	Q8IV77	575 aa		15.71	■□□□□ 0.11
UMPS-209	ENST00000497791	C1orf131	Q8NDD1	294 aa	Known RBP	15.71	■□□□□ 0.11
UMPS-209	ENST00000497791	SYN2	Q92777	582 aa	Predicted RBP	15.71	■□□□□ 0.11
UMPS-209	ENST00000497791	AGPAT1	Q99943	283 aa		15.71	■□□□□ 0.11
UMPS-209	ENST00000497791	PLEKHA4	Q9H4M7	779 aa		15.71	■□□□□ 0.11
UMPS-209	ENST00000497791	CSNK1G1	Q9HCP0	422 aa		15.71	■□□□□ 0.11
UMPS-209	ENST00000497791	DMAP1	Q9NPF5	467 aa	Predicted RBP	15.71	■□□□□ 0.11
UMPS-209	ENST00000497791	CLDND1	Q9NY35	253 aa		15.71	■□□□□ 0.11
UMPS-209	ENST00000497791	VCAN	P13611	3396 aa		15.71	■□□□□ 0.1
UMPS-209	ENST00000497791	ATP8B3	O60423	1300 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	ZMYND10	O75800	440 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	TPM1	P09493	284 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	BCAT1	P54687	386 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	MEA1	Q16626	185 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	LIN9	Q5TKA1	542 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	SYCE2	Q6PIF2	218 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	TMC5	Q6UXY8	1006 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	EP400NL	Q6ZTU2	488 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	SCAMP5	Q8TAC9	235 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	ZNF707	Q96C28	371 aa	Predicted RBP	15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	NUCKS1	Q9H1E3	243 aa	Known RBP	15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	HCFC1R1	Q9NWW0	138 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	TAS2R14	Q9NYV8	317 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	PCDHGC3	Q9UN70	934 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	DOCK8	Q8NF50	2099 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	DDX3X	O00571	662 aa	Known RBP eCLIP	15.7	■□□□□ 0.1	8e-19	■■■□□ 17.3
UMPS-209	ENST00000497791	TNFRSF10B	O14763	440 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	MED7	O43513	233 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	SERPING1	P05155	500 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	TUFM	P49411	452 aa	Known RBP	15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	BST2	Q10589	180 aa	Known RBP	15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	STIL	Q15468	1287 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	CLUL1	Q15846	466 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	C2CD6	Q53TS8	623 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	TDRD12	Q587J7	1177 aa	Known RBP	15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	PPM1L	Q5SGD2	360 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	RARS2	Q5T160	578 aa	Known RBP	15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	SMYD5	Q6GMV2	418 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	TMEM184A	Q6ZMB5	413 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	PIGZ	Q86VD9	579 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	SLC35F5	Q8WV83	523 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	CPA5	Q8WXQ8	436 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	NDRG1	Q92597	394 aa	Known RBP	15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	C8orf48	Q96LL4	319 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	DNAI2	Q9GZS0	605 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	SEPT11	Q9NVA2	429 aa	Known RBP	15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	IMPACT	Q9P2X3	320 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	HESX1	Q9UBX0	185 aa		15.7	■□□□□ 0.1
UMPS-209	ENST00000497791	CCDC195	A0A1B0GUA6	201 aa		15.69	■□□□□ 0.1
UMPS-209	ENST00000497791	XPO1	O14980	1071 aa	Known RBP	15.69	■□□□□ 0.1
UMPS-209	ENST00000497791	C1R	P00736	705 aa		15.69	■□□□□ 0.1
UMPS-209	ENST00000497791	HMGA1	P17096	107 aa	Known RBP	15.69	■□□□□ 0.1
UMPS-209	ENST00000497791	EIF4A3	P38919	411 aa	Known RBP	15.69	■□□□□ 0.1
UMPS-209	ENST00000497791	NOMO3	P69849	1222 aa		15.69	■□□□□ 0.1
UMPS-209	ENST00000497791	NAA35	Q5VZE5	725 aa		15.69	■□□□□ 0.1
UMPS-209	ENST00000497791	ANKRD54	Q6NXT1	300 aa		15.69	■□□□□ 0.1
UMPS-209	ENST00000497791	CCDC149	Q6ZUS6	474 aa		15.69	■□□□□ 0.1
UMPS-209	ENST00000497791	CCDC186	Q7Z3E2	898 aa		15.69	■□□□□ 0.1
UMPS-209	ENST00000497791	HS6ST3	Q8IZP7	471 aa		15.69	■□□□□ 0.1
UMPS-209	ENST00000497791	SLC30A5	Q8TAD4	765 aa		15.69	■□□□□ 0.1
UMPS-209	ENST00000497791	CASP10	Q92851	521 aa		15.69	■□□□□ 0.1
UMPS-209	ENST00000497791	ZNF334	Q9HCZ1	680 aa	Predicted RBP	15.69	■□□□□ 0.1
UMPS-209	ENST00000497791	HSFX1	Q9UBD0	423 aa		15.69	■□□□□ 0.1
UMPS-209	ENST00000497791	MAFF	Q9ULX9	164 aa		15.69	■□□□□ 0.1
UMPS-209	ENST00000497791	SPDYE4	A6NLX3	237 aa		15.68	■□□□□ 0.1
UMPS-209	ENST00000497791	SLC38A8	A6NNN8	435 aa		15.68	■□□□□ 0.1
UMPS-209	ENST00000497791	TRIM66	O15016	1216 aa		15.68	■□□□□ 0.1
UMPS-209	ENST00000497791	CYP1A1	P04798	512 aa	Predicted RBP	15.68	■□□□□ 0.1
UMPS-209	ENST00000497791	PLA2G4A	P47712	749 aa		15.68	■□□□□ 0.1
UMPS-209	ENST00000497791	ALDH1A3	P47895	512 aa		15.68	■□□□□ 0.1
UMPS-209	ENST00000497791	PGF	P49763	221 aa		15.68	■□□□□ 0.1
UMPS-209	ENST00000497791	SLC5A3	P53794	718 aa		15.68	■□□□□ 0.1
UMPS-209	ENST00000497791	NTHL1	P78549	312 aa		15.68	■□□□□ 0.1
UMPS-209	ENST00000497791	IFRD2	Q12894	506 aa	Predicted RBP	15.68	■□□□□ 0.1
UMPS-209	ENST00000497791	PTPN20	Q4JDL3	420 aa		15.68	■□□□□ 0.1
UMPS-209	ENST00000497791	ZNF677	Q86XU0	584 aa		15.68	■□□□□ 0.1
UMPS-209	ENST00000497791	TMEM139	Q8IV31	216 aa		15.68	■□□□□ 0.1
UMPS-209	ENST00000497791	HDAC7	Q8WUI4	952 aa		15.68	■□□□□ 0.1
UMPS-209	ENST00000497791	PABPC5	Q96DU9	382 aa	Known RBP	15.68	■□□□□ 0.1
UMPS-209	ENST00000497791	PDLIM2	Q96JY6	352 aa		15.68	■□□□□ 0.1
UMPS-209	ENST00000497791	CPXM1	Q96SM3	734 aa		15.68	■□□□□ 0.1
UMPS-209	ENST00000497791	PDCL3	Q9H2J4	239 aa		15.68	■□□□□ 0.1
UMPS-209	ENST00000497791	TMCO5B	A8MYB1	307 aa		15.67	■□□□□ 0.1
UMPS-209	ENST00000497791		H3BQ06	376 aa	Predicted RBP	15.67	■□□□□ 0.1
UMPS-209	ENST00000497791	LRG1	P02750	347 aa		15.67	■□□□□ 0.1
UMPS-209	ENST00000497791	CCDC172	P0C7W6	258 aa		15.67	■□□□□ 0.1
UMPS-209	ENST00000497791	SETSIP	P0DME0	302 aa		15.67	■□□□□ 0.1
UMPS-209	ENST00000497791	TNFAIP3	P21580	790 aa		15.67	■□□□□ 0.1
UMPS-209	ENST00000497791	CDH5	P33151	784 aa	Predicted RBP	15.67	■□□□□ 0.1
UMPS-209	ENST00000497791	PDCL	Q13371	301 aa		15.67	■□□□□ 0.1
UMPS-209	ENST00000497791	PLD1	Q13393	1074 aa		15.67	■□□□□ 0.1
UMPS-209	ENST00000497791	CLEC16A	Q2KHT3	1053 aa		15.67	■□□□□ 0.1
UMPS-209	ENST00000497791	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	15.67	■□□□□ 0.1
UMPS-209	ENST00000497791	CLEC4C	Q8WTT0	213 aa		15.67	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms