RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 CLUL1Q15846 466 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 CNGA2Q16280 664 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 PPM1LQ5SGD2 360 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 ARHGAP17Q68EM7 881 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 VSTM1Q6UX27 236 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 TMEM184AQ6ZMB5 413 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 RTL10Q7L3V2 364 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 SCN4BQ8IWT1 228 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 FUKQ8N0W3 1084 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 VN1R2Q8NFZ6 395 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 SLC7A14Q8TBB6 771 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 BAP1Q92560 729 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 SEPT5Q99719 369 aaPredicted RBP21.23■□□□□ 0.99
CTSD-206ENST00000497544 ZNF518BQ9C0D4 1074 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 TTYH3Q9C0H2 523 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 NUCKS1Q9H1E3 243 aaKnown RBP21.23■□□□□ 0.99
CTSD-206ENST00000497544 DZANK1Q9NVP4 752 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 HESX1Q9UBX0 185 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 ZMYND10O75800 440 aa21.22■□□□□ 0.99
CTSD-206ENST00000497544 CALCAP01258 141 aa21.22■□□□□ 0.99
CTSD-206ENST00000497544 LRG1P02750 347 aa21.22■□□□□ 0.99
CTSD-206ENST00000497544 FERP16591 822 aa21.22■□□□□ 0.99
CTSD-206ENST00000497544 GRIK1P39086 918 aa21.22■□□□□ 0.99
CTSD-206ENST00000497544 MAGEA11P43364 429 aa21.22■□□□□ 0.99
CTSD-206ENST00000497544 RPL10AP62906 217 aaKnown RBP21.22■□□□□ 0.99
CTSD-206ENST00000497544 ZBED6P86452 979 aa21.22■□□□□ 0.99
CTSD-206ENST00000497544 SFMBT2Q5VUG0 894 aa21.22■□□□□ 0.99
CTSD-206ENST00000497544 PAQR9Q6ZVX9 377 aa21.22■□□□□ 0.99
CTSD-206ENST00000497544 FAM35AQ86V20 835 aa21.22■□□□□ 0.99
CTSD-206ENST00000497544 DRC7Q8IY82 874 aa21.22■□□□□ 0.99
CTSD-206ENST00000497544 TTC9BQ8N6N2 239 aa21.22■□□□□ 0.99
CTSD-206ENST00000497544 TFAP2BQ92481 460 aa21.22■□□□□ 0.99
CTSD-206ENST00000497544 SMARCD1Q96GM5 515 aa21.22■□□□□ 0.99
CTSD-206ENST00000497544 CRISPLD1Q9H336 500 aa21.22■□□□□ 0.99
CTSD-206ENST00000497544 LRRC53A6NM62 1247 aa21.21■□□□□ 0.99
CTSD-206ENST00000497544 AP1G2O75843 785 aa21.21■□□□□ 0.99
CTSD-206ENST00000497544 GYPCP04921 128 aa21.21■□□□□ 0.99
CTSD-206ENST00000497544 AVPR2P30518 371 aa21.21■□□□□ 0.99
CTSD-206ENST00000497544 CASP14P31944 242 aa21.21■□□□□ 0.99
CTSD-206ENST00000497544 ARID5AQ03989 594 aa21.21■□□□□ 0.99
CTSD-206ENST00000497544 SLC47A2Q86VL8 602 aa21.21■□□□□ 0.99
CTSD-206ENST00000497544 ZNF606Q8WXB4 792 aa21.21■□□□□ 0.99
CTSD-206ENST00000497544 RHOBTB2Q9BYZ6 727 aa21.21■□□□□ 0.99
CTSD-206ENST00000497544 ACP6Q9NPH0 428 aa21.21■□□□□ 0.99
CTSD-206ENST00000497544 INSL5Q9Y5Q6 135 aa21.21■□□□□ 0.99
CTSD-206ENST00000497544 DMXL1Q9Y485 3027 aa21.21■□□□□ 0.99
CTSD-206ENST00000497544 PTPRDP23468 1912 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 O00370 1275 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 SOAT2O75908 522 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 GLP2RO95838 553 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 FAM200BP0CF97 657 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 CYP11B1P15538 503 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 ANXA13P27216 316 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 KRT9P35527 623 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 PDE6CP51160 858 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 EPHB3P54753 998 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 SLC8A3P57103 927 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 DLX2Q07687 328 aaPredicted RBP21.2■□□□□ 0.98
CTSD-206ENST00000497544 PLD1Q13393 1074 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 GSE1Q14687 1217 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 ASIC2Q16515 512 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 DDR2Q16832 855 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 CTC1Q2NKJ3 1217 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 GOLGA7BQ2TAP0 167 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 ANKRD54Q6NXT1 300 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 LCLAT1Q6UWP7 414 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 GPIHBP1Q8IV16 184 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 ANKRD52Q8NB46 1076 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 DUSP16Q9BY84 665 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 PDCL3Q9H2J4 239 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 SFXN1Q9H9B4 322 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 KRT82Q9NSB4 513 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 ZDHHC7Q9NXF8 308 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 TSPAN16Q9UKR8 245 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 YIPF1Q9Y548 306 aa21.2■□□□□ 0.98
CTSD-206ENST00000497544 CCDC195A0A1B0GUA6 201 aa21.19■□□□□ 0.98
CTSD-206ENST00000497544 TRIM66O15016 1216 aa21.19■□□□□ 0.98
CTSD-206ENST00000497544 RFPL2O75678 378 aa21.19■□□□□ 0.98
CTSD-206ENST00000497544 HNRNPA1P09651 372 aaKnown RBP eCLIP21.19■□□□□ 0.98
CTSD-206ENST00000497544 HOXB8P17481 243 aaPredicted RBP21.19■□□□□ 0.98
CTSD-206ENST00000497544 TWF1Q12792 350 aa21.19■□□□□ 0.98
CTSD-206ENST00000497544 VEPH1Q14D04 833 aa21.19■□□□□ 0.98
CTSD-206ENST00000497544 TSR1Q2NL82 804 aaKnown RBP21.19■□□□□ 0.98
CTSD-206ENST00000497544 ELMOD1Q8N336 334 aa21.19■□□□□ 0.98
CTSD-206ENST00000497544 C12orf76Q8N812 135 aaPredicted RBP21.19■□□□□ 0.98
CTSD-206ENST00000497544 UBA3Q8TBC4 463 aa21.19■□□□□ 0.98
CTSD-206ENST00000497544 ZSWIM1Q9BR11 485 aa21.19■□□□□ 0.98
CTSD-206ENST00000497544 AIPL1Q9NZN9 384 aa21.19■□□□□ 0.98
CTSD-206ENST00000497544 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.19■□□□□ 0.98
CTSD-206ENST00000497544 MICAL2O94851 1124 aa21.18■□□□□ 0.98
CTSD-206ENST00000497544 NPR3P17342 541 aa21.18■□□□□ 0.98
CTSD-206ENST00000497544 CDC25BP30305 580 aa21.18■□□□□ 0.98
CTSD-206ENST00000497544 HOXA9P31269 272 aa21.18■□□□□ 0.98
CTSD-206ENST00000497544 GPR15P49685 360 aa21.18■□□□□ 0.98
CTSD-206ENST00000497544 MAP3K7CLP57077 242 aa21.18■□□□□ 0.98
CTSD-206ENST00000497544 TAF12Q16514 161 aa21.18■□□□□ 0.98
CTSD-206ENST00000497544 GIPC2Q8TF65 315 aa21.18■□□□□ 0.98
CTSD-206ENST00000497544 C8orf48Q96LL4 319 aa21.18■□□□□ 0.98
CTSD-206ENST00000497544 ZNF512Q96ME7 567 aaPredicted RBP21.18■□□□□ 0.98
CTSD-206ENST00000497544 KCNK16Q96T55 309 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms